RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 SPIN3Q5JUX0 258 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 MEPCEQ7L2J0 689 aaKnown RBP10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 ZNF596Q8TC21 504 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 CCDC124Q96CT7 223 aaKnown RBP10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 COQ2Q96H96 371 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 NOL4LQ96MY1 436 aaPredicted RBP10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 ZNF649Q9BS31 505 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 GPR61Q9BZJ8 451 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 HYDINQ4G0P3 5121 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 A0A1W2PPI3 338 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 LEUTXA8MZ59 168 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 OR2H2O95918 312 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 LMO1P25800 156 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 PTGES3Q15185 160 aaKnown RBP10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 ODF4Q2M2E3 257 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 C17orf58Q2M2W7 97 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 NXNL2Q5VZ03 156 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 Q8IYB0 196 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 FAM58AQ8N1B3 248 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 PRSS35Q8N3Z0 413 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 C5orf56Q8N8D9 126 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 DPF1Q92782 380 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 ADAT3Q96EY9 351 aaPredicted RBP10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 DUX3Q96PT4 197 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 MNTQ99583 582 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 GAL3ST2Q9H3Q3 398 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 HMG20AQ9NP66 347 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 TAS2R3Q9NYW6 316 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 SLC7A11Q9UPY5 501 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 MOB4Q9Y3A3 225 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 PCDHGB5Q9Y5G0 923 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 HSPE1-MOB4S4R3N1 261 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 U3KQK5 164 aa10.88□□□□□ -0.67
CLPTM1-208ENST00000588274 CSMD3Q7Z407 3707 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 M0QZK8 103 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 SIRPB1O00241 398 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 SYT7O43581 403 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 GATBO75879 557 aaKnown RBP10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 DCTN3O75935 186 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 CSN2P05814 226 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 SNRNP70P08621 437 aaKnown RBP10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 CGB3P0DN86 165 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 CGB7P0DN87 165 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 MYCNOSP40205 109 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 KIR3DL2P43630 455 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 OR3A4PP47883 348 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 DAPP51397 102 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 LUMP51884 338 aaPredicted RBP10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 CDC42P60953 191 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 DIAPH2-AS1Q14236 149 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 SLX4IPQ5VYV7 408 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 C12orf73Q69YU5 71 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 OR52W1Q6IF63 320 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 TRAPPC6BQ86SZ2 158 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 ENTHD1Q8IYW4 607 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 DNAAF1Q8NEP3 725 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 OR51D1Q8NGF3 324 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 BORCS8Q96FH0 119 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 RAX2Q96IS3 184 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 KIRREL1Q96J84 757 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 MCRIP2Q9BUT9 160 aaKnown RBP10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 COMMD4Q9H0A8 199 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 ZNF556Q9HAH1 456 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 PLEKHA1Q9HB21 404 aa10.87□□□□□ -0.67
CLPTM1-208ENST00000588274 LOC107986453A0A1B0GWG9 222 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 A0A1W2PQL4 384 aaPredicted RBP10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 ODAMA1E959 279 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 AQP12BA6NM10 295 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 OOSP1A8MZH6 123 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 ZNF670-ZNF695F2Z2N8 137 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 RPP14O95059 124 aaKnown RBP10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 NHLRC4P0CG21 123 aaPredicted RBP10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 PRKACAP17612 351 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 SLC6A1P30531 599 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 MNAT1P51948 309 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 SNU13P55769 128 aaKnown RBP10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 DGCR2P98153 550 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 AESQ08117 197 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 DCTN2Q13561 401 aaKnown RBP10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 KIAA2026Q5HYC2 2103 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 Q6P435 159 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 THNSL2Q86YJ6 484 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 AQP12AQ8IXF9 295 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 KLHL30-AS1Q8NEE0 82 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 OR56B4Q8NH76 319 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 TMEM163Q8TC26 289 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 TFAP2CQ92754 450 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 STMN2Q93045 179 aa10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 PPIL3Q9H2H8 161 aaKnown RBP10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 PAPOLBQ9NRJ5 636 aaKnown RBP10.86□□□□□ -0.67
CLPTM1-208ENST00000588274 TRGV10A0A0A0MS01 117 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 LINC01548A6NM66 108 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 ZAR1LA6NP61 321 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 MITFO75030 526 aaPredicted RBP10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 FKBP6O75344 327 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 KDM4BO94953 1096 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 POU3F4P49335 361 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 RBP2P50120 134 aa10.85□□□□□ -0.67
CLPTM1-208ENST00000588274 C9orf152Q5JTZ5 239 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms