RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ISG15P05161 165 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 P2RX3P56373 397 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 KPNB1Q14974 876 aaKnown RBP11.53□□□□□ -0.56
VMP1-206ENST00000587945 BEAN1Q3B7T3 259 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 TMEM95Q3KNT9 176 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 SLC25A30Q5SVS4 291 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 MINOS1Q5TGZ0 78 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 PRAMEF5Q5TYX0 476 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 ACBD7Q8N6N7 88 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 OR13C3Q8NGS6 347 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 SPSB1Q96BD6 273 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 LGALS12Q96DT0 336 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 PELI1Q96FA3 418 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 CLEC7AQ9BXN2 247 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 EXOSC4Q9NPD3 245 aaKnown RBP11.53□□□□□ -0.56
VMP1-206ENST00000587945 ING3Q9NXR8 418 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 GLS2Q9UI32 602 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 PITPNC1Q9UKF7 332 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 HHLA2Q9UM44 414 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 ORC6Q9Y5N6 252 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 MINOS1-NBL1R4GNA1 71 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 A0A0G2JK05 382 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 FAM172BPA6NC97 362 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 OR4C45A6NMZ5 311 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 SH2D1BO14796 132 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 CD24P25063 80 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 GDNFP39905 211 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 GLIPR1P48060 266 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 DYNLT3P51808 116 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 SCN1BQ07699 218 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 AESQ08117 197 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 ALKBH1Q13686 389 aaKnown RBP11.52□□□□□ -0.57
VMP1-206ENST00000587945 SPIN3Q5JUX0 258 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 SAMD5Q5TGI4 173 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 MEDAGQ5VYS4 303 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 LHFPL3Q86UP9 236 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 CBR4Q8N4T8 237 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 DTX3Q8N9I9 347 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 OR4P4Q8NGL7 312 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.57
VMP1-206ENST00000587945 PRSS22Q9GZN4 317 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 ISG20L2Q9H9L3 353 aaKnown RBP11.52□□□□□ -0.57
VMP1-206ENST00000587945 NEK6Q9HC98 313 aa11.52□□□□□ -0.57
VMP1-206ENST00000587945 EXOGQ9Y2C4 368 aaKnown RBP11.52□□□□□ -0.57
VMP1-206ENST00000587945 UBE2J1Q9Y385 318 aaPredicted RBP11.52□□□□□ -0.57
VMP1-206ENST00000587945 KDM4BO94953 1096 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 MT-ND2P03891 347 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 CDK2P24941 298 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 HTR1DP28221 377 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 ERP29P30040 261 aaKnown RBP11.51□□□□□ -0.57
VMP1-206ENST00000587945 ALDH3A2P51648 485 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 CCR9P51686 369 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 ARSJQ5FYB0 599 aaPredicted RBP11.51□□□□□ -0.57
VMP1-206ENST00000587945 ABHD12Q8N2K0 398 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 WIPF2Q8TF74 440 aaPredicted RBP11.51□□□□□ -0.57
VMP1-206ENST00000587945 ALG8Q9BVK2 526 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 WNT10AQ9GZT5 417 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 MMP28Q9H239 520 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 AMBNQ9NP70 447 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 MYRFQ9Y2G1 1151 aa11.51□□□□□ -0.57
VMP1-206ENST00000587945 TET2Q6N021 2002 aaPredicted RBP11.5□□□□□ -0.57
VMP1-206ENST00000587945 TRGV10A0A0A0MS01 117 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 ADARB2-AS1A8MUL3 147 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 FAM90A22PA8MWA6 464 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 E9PI62 339 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 PEX14O75381 377 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 ZNF44P15621 663 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 GABRB1P18505 474 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 VDAC2P45880 294 aaPredicted RBP11.5□□□□□ -0.57
VMP1-206ENST00000587945 FBLN7Q53RD9 439 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 UTF1Q5T230 341 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 Q6P435 159 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 ZBTB49Q6ZSB9 765 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 R3HDM4Q96D70 268 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 COMMD4Q9H0A8 199 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 ZCCHC4Q9H5U6 513 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 DPM3Q9P2X0 92 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 GMPPBQ9Y5P6 360 aa11.5□□□□□ -0.57
VMP1-206ENST00000587945 ODAMA1E959 279 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 SLC33A1O00400 549 aaPredicted RBP11.49□□□□□ -0.57
VMP1-206ENST00000587945 TMEM225BP0DP42 221 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 DBTP11182 482 aaKnown RBP11.49□□□□□ -0.57
VMP1-206ENST00000587945 LMO1P25800 156 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 EMX1Q04741 257 aaPredicted RBP11.49□□□□□ -0.57
VMP1-206ENST00000587945 IL18R1Q13478 541 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 GALEQ14376 348 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 OXLD1Q5BKU9 147 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 KPRPQ5T749 579 aaPredicted RBP11.49□□□□□ -0.57
VMP1-206ENST00000587945 LPCAT4Q643R3 524 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 HEPN1Q6WQI6 88 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 NDUFA11Q86Y39 141 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 CORO2AQ92828 525 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 COQ2Q96H96 371 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 PDCD1LG2Q9BQ51 273 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 OCSTAMPQ9BR26 566 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 ZNF649Q9BS31 505 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 PPIL3Q9H2H8 161 aaKnown RBP11.49□□□□□ -0.57
VMP1-206ENST00000587945 GAL3ST2Q9H3Q3 398 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 ZNF286AQ9HBT8 521 aa11.49□□□□□ -0.57
VMP1-206ENST00000587945 PCDHGB5Q9Y5G0 923 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms