RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 OR52W1Q6IF63 320 aa11.31□□□□□ -0.6
ERCC1-205ENST00000587888 C10orf99Q6UWK7 81 aa11.31□□□□□ -0.6
ERCC1-205ENST00000587888 CCDC54Q8NEL0 328 aa11.31□□□□□ -0.6
ERCC1-205ENST00000587888 PP6455Q8WZ26 134 aa11.31□□□□□ -0.6
ERCC1-205ENST00000587888 MYDGFQ969H8 173 aa11.31□□□□□ -0.6
ERCC1-205ENST00000587888 RFT1Q96AA3 541 aa11.31□□□□□ -0.6
ERCC1-205ENST00000587888 FGGYQ96C11 551 aa11.31□□□□□ -0.6
ERCC1-205ENST00000587888 SLC7A6OSQ96CW6 309 aaPredicted RBP11.31□□□□□ -0.6
ERCC1-205ENST00000587888 ADAT3Q96EY9 351 aaPredicted RBP11.31□□□□□ -0.6
ERCC1-205ENST00000587888 AKR1E2Q96JD6 320 aa11.31□□□□□ -0.6
ERCC1-205ENST00000587888 SLC25A33Q9BSK2 321 aa11.31□□□□□ -0.6
ERCC1-205ENST00000587888 TRGV10A0A0A0MS01 117 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 TRBV2A0A0J9YWF9 115 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 LEUTXA8MZ59 168 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 K7EIL1 84 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 TOR1AO14656 332 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 OR2H2O95918 312 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 OCM2P0CE71 109 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 OCMP0CE72 109 aaPredicted RBP11.3□□□□□ -0.6
ERCC1-205ENST00000587888 ZNF20P17024 532 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 ATF1P18846 271 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 ERP29P30040 261 aaKnown RBP11.3□□□□□ -0.6
ERCC1-205ENST00000587888 GDNFP39905 211 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 GLIPR1P48060 266 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 SLC35A2P78381 396 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 BDH1Q02338 343 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 AESQ08117 197 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 PDZK1IP1Q13113 114 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 ATP6AP1Q15904 470 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 C9orf152Q5JTZ5 239 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 SPIN3Q5JUX0 258 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 C16orf82Q7Z2V1 217 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 AMIGO2Q86SJ2 522 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 RTN4RL2Q86UN3 420 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 ZDHHC13Q8IUH4 622 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 DNAAF1Q8NEP3 725 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 ZNF596Q8TC21 504 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 C10orf35Q96D05 121 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 GAL3ST2Q9H3Q3 398 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 LIN7BQ9HAP6 207 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 HMG20AQ9NP66 347 aa11.3□□□□□ -0.6
ERCC1-205ENST00000587888 EXOSC4Q9NPD3 245 aaKnown RBP11.3□□□□□ -0.6
ERCC1-205ENST00000587888 UBCP0CG48 685 aaKnown RBP11.29□□□□□ -0.6
ERCC1-205ENST00000587888 PRKACBP22694 351 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 ARHGDIBP52566 201 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 KRTAP10-11P60412 298 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 CDC42P60953 191 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 ZNF85Q03923 595 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 RBM39Q14498 530 aaKnown RBP11.29□□□□□ -0.6
ERCC1-205ENST00000587888 VAX1Q5SQQ9 334 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 HEPN1Q6WQI6 88 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 RNF144BQ7Z419 303 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 FAM220AQ7Z4H9 259 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 OR4X2Q8NGF9 303 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 RBM14Q96PK6 669 aaKnown RBP11.29□□□□□ -0.6
ERCC1-205ENST00000587888 SPACA5Q96QH8 159 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 CIB1Q99828 191 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 ZNF286AQ9HBT8 521 aa11.29□□□□□ -0.6
ERCC1-205ENST00000587888 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.29□□□□□ -0.6
ERCC1-205ENST00000587888 IGKV1-12A0A0C4DH73 117 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 WI2-2373I1.2A0A1W2PRP0 233 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 FUOMA2VDF0 154 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 BUB1B-PAK6H3BSN5 160 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 OR2F2O95006 317 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 IGKV1D-12P01611 117 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 ZNF44P15621 663 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 FASP25445 335 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 OR3A4PP47883 348 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 PRRX1P54821 245 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 UTF1Q5T230 341 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 TMEM244Q5VVB8 128 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 LHFPL2Q6ZUX7 228 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 OR4D6Q8NGJ1 314 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 OR5D18Q8NGL1 313 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 OR2G2Q8NGZ5 317 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 CORO2AQ92828 525 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
ERCC1-205ENST00000587888 EME1Q96AY2 570 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 RCC1LQ96I51 464 aaKnown RBP11.28□□□□□ -0.6
ERCC1-205ENST00000587888 RIBC2Q9H4K1 309 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 NEK6Q9HC98 313 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 TAS2R3Q9NYW6 316 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 FRRS1LQ9P0K9 344 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 ENOPH1Q9UHY7 261 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 AP4S1Q9Y587 144 aa11.28□□□□□ -0.6
ERCC1-205ENST00000587888 NOTCH3Q9UM47 2321 aa11.27□□□□□ -0.6
ERCC1-205ENST00000587888 CLIC3O95833 236 aa11.27□□□□□ -0.61
ERCC1-205ENST00000587888 IGLV1-47P01700 117 aa11.27□□□□□ -0.61
ERCC1-205ENST00000587888 AMY1AP04745 511 aa11.27□□□□□ -0.61
ERCC1-205ENST00000587888 AMY2AP04746 511 aa11.27□□□□□ -0.61
ERCC1-205ENST00000587888 NFYBP25208 207 aa11.27□□□□□ -0.61
ERCC1-205ENST00000587888 HOXD3P31249 432 aaPredicted RBP11.27□□□□□ -0.61
ERCC1-205ENST00000587888 CEACAM3P40198 252 aa11.27□□□□□ -0.61
ERCC1-205ENST00000587888 KRBOX4Q5JUW0 171 aa11.27□□□□□ -0.61
ERCC1-205ENST00000587888 TPTE2P1Q5T6R2 138 aa11.27□□□□□ -0.61
ERCC1-205ENST00000587888 C11orf87Q6NUJ2 197 aa11.27□□□□□ -0.61
ERCC1-205ENST00000587888 UTS2BQ765I0 119 aa11.27□□□□□ -0.61
ERCC1-205ENST00000587888 OR8J1Q8NGP2 316 aa11.27□□□□□ -0.61
ERCC1-205ENST00000587888 OPALINQ96PE5 141 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms