RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 STRAPQ9Y3F4 350 aaKnown RBP17.1■□□□□ 0.33
MBD1-216ENST00000587605 COL27A1Q8IZC6 1860 aaPredicted RBP17.1■□□□□ 0.33
MBD1-216ENST00000587605 OR7C1O76099 320 aaPredicted RBP17.09■□□□□ 0.33
MBD1-216ENST00000587605 DIRAS3O95661 229 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 PPYP01298 95 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 SFTA3P0C7M3 94 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 SNIP1Q8TAD8 396 aaKnown RBP17.09■□□□□ 0.33
MBD1-216ENST00000587605 PSMF1Q92530 271 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 SPIN2AQ99865 258 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 SPIN2BQ9BPZ2 258 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 REPIN1Q9BWE0 567 aaKnown RBP17.09■□□□□ 0.33
MBD1-216ENST00000587605 RNF122Q9H9V4 155 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 LUZP4Q9P127 313 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 ABI3Q9P2A4 366 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 MLXQ9UH92 298 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 FAM96BQ9Y3D0 163 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 USP34Q70CQ2 3546 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 SDK2Q58EX2 2172 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 PINLYPA6NC86 204 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 ZNF587BE7ETH6 402 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 PHF1O43189 567 aaPredicted RBP17.09■□□□□ 0.33
MBD1-216ENST00000587605 SYNGR4O95473 234 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 ARF1P84077 181 aaKnown RBP17.09■□□□□ 0.33
MBD1-216ENST00000587605 MPV17LQ2QL34 196 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 TMEM88Q6PEY1 159 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 TIPARPQ7Z3E1 657 aaKnown RBP17.09■□□□□ 0.33
MBD1-216ENST00000587605 KDF1Q8NAX2 398 aaPredicted RBP17.09■□□□□ 0.33
MBD1-216ENST00000587605 CPEB3Q8NE35 698 aaKnown RBP17.09■□□□□ 0.33
MBD1-216ENST00000587605 OR2M7Q8NG81 312 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 EXTL1Q92935 676 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 KPTNQ9Y664 436 aa17.09■□□□□ 0.33
MBD1-216ENST00000587605 RTTNQ86VV8 2226 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 DUXBA0A1W2PPF3 345 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 FAM221AA4D161 298 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 MPPED1O15442 326 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 DANCRP0C864 163 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 PRSS12P56730 875 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 FGF12P61328 243 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 GNMTQ14749 295 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 DPPA2Q7Z7J5 298 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 CALHM1Q8IU99 346 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 C1orf210Q8IVY1 113 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 OR4D5Q8NGN0 318 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 ERGIC1Q969X5 290 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 APOBEC3DQ96AK3 386 aaPredicted RBP17.08■□□□□ 0.33
MBD1-216ENST00000587605 KIRREL1Q96J84 757 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 PAPOLGQ9BWT3 736 aaKnown RBP17.08■□□□□ 0.33
MBD1-216ENST00000587605 SMIM3Q9BZL3 60 aa17.08■□□□□ 0.33
MBD1-216ENST00000587605 ZNF703Q9H7S9 590 aaPredicted RBP17.08■□□□□ 0.33
MBD1-216ENST00000587605 CTXN2P0C2S0 81 aa17.08■□□□□ 0.32
MBD1-216ENST00000587605 SPP1P10451 314 aa17.08■□□□□ 0.32
MBD1-216ENST00000587605 NPBWR1P48145 328 aa17.08■□□□□ 0.32
MBD1-216ENST00000587605 LHX2P50458 406 aa17.08■□□□□ 0.32
MBD1-216ENST00000587605 UCP2P55851 309 aa17.08■□□□□ 0.32
MBD1-216ENST00000587605 BRICD5Q6PL45 260 aa17.08■□□□□ 0.32
MBD1-216ENST00000587605 MRPL21Q7Z2W9 205 aaKnown RBP17.08■□□□□ 0.32
MBD1-216ENST00000587605 LINC00596Q86U02 117 aa17.08■□□□□ 0.32
MBD1-216ENST00000587605 CBLN2Q8IUK8 224 aa17.08■□□□□ 0.32
MBD1-216ENST00000587605 MKXQ8IYA7 352 aa17.08■□□□□ 0.32
MBD1-216ENST00000587605 ZDHHC23Q8IYP9 409 aa17.08■□□□□ 0.32
MBD1-216ENST00000587605 OR56B2PQ8NGI1 322 aa17.08■□□□□ 0.32
MBD1-216ENST00000587605 THOC3Q96J01 351 aaKnown RBP17.08■□□□□ 0.32
MBD1-216ENST00000587605 PIGBOS1A0A0B4J2F0 54 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 C3orf85A0A1B0GTC6 90 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 ZNF724A8MTY0 619 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 TSPAN15O95858 294 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 PDGFBP01127 241 aaPredicted RBP17.07■□□□□ 0.32
MBD1-216ENST00000587605 TK1P04183 234 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 RFC3P40938 356 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 PRDX4Q13162 271 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 PEA15Q15121 130 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 CEACAM21Q3KPI0 293 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 ABHD17BQ5VST6 288 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 TMEM56Q96MV1 263 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 RIMS4Q9H426 269 aaPredicted RBP17.07■□□□□ 0.32
MBD1-216ENST00000587605 SLC7A10Q9NS82 523 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 PLA2G2EQ9NZK7 142 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 KLF2Q9Y5W3 355 aaPredicted RBP17.07■□□□□ 0.32
MBD1-216ENST00000587605 TMEM56-RWDD3S4R434 201 aa17.07■□□□□ 0.32
MBD1-216ENST00000587605 KIR2DS1A0A191URI9 304 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 TRDCB7Z8K6 153 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 PAX6P26367 422 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 ARR3P36575 388 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 KIR2DS4P43632 304 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 KIR2DS1Q14954 304 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 DBX2Q6ZNG2 339 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 NAXEQ8NCW5 288 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 GTF3AQ92664 365 aaKnown RBP17.06■□□□□ 0.32
MBD1-216ENST00000587605 ADAT1Q9BUB4 502 aaKnown RBP17.06■□□□□ 0.32
MBD1-216ENST00000587605 SPRY4Q9C004 299 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 TMEM222Q9H0R3 208 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 PLK3Q9H4B4 646 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 Q9N2K0 584 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 FAM157AC9JC47 383 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 NAPSAO96009 420 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 CD80P33681 288 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 CLDN18P56856 261 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 DAZAP2Q15038 168 aaPredicted RBP17.06■□□□□ 0.32
MBD1-216ENST00000587605 ZNF565Q8N9K5 539 aa17.06■□□□□ 0.32
MBD1-216ENST00000587605 GPR87Q9BY21 358 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms