RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 LEUTXA8MZ59 168 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 RPP14O95059 124 aaKnown RBP9.38□□□□□ -0.91
BRCA1-225ENST00000586385 OR3A4PP47883 348 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 DAPP51397 102 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 GYS2P54840 703 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 SNU13P55769 128 aaKnown RBP9.38□□□□□ -0.91
BRCA1-225ENST00000586385 PTGES3Q15185 160 aaKnown RBP9.38□□□□□ -0.91
BRCA1-225ENST00000586385 C17orf58Q2M2W7 97 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 C9orf152Q5JTZ5 239 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 SLX4IPQ5VYV7 408 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 FAHD1Q6P587 224 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 TRAPPC6BQ86SZ2 158 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 RTN4RL2Q86UN3 420 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 RDH10Q8IZV5 341 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 FAM58AQ8N1B3 248 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 PRSS35Q8N3Z0 413 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 ZNF596Q8TC21 504 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 TFAP2CQ92754 450 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 ADAT3Q96EY9 351 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-225ENST00000586385 GPR61Q9BZJ8 451 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 ZNF556Q9HAH1 456 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 HMG20AQ9NP66 347 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 CLN6Q9NWW5 311 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 LINC00527Q9UJ94 153 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 A0A1W2PPI3 338 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 LINC01548A6NM66 108 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 ZNF670-ZNF695F2Z2N8 137 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 GNGT2O14610 69 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 SYT7O43581 403 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 MITFO75030 526 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-225ENST00000586385 DCTN3O75935 186 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 OR2H2O95918 312 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 CGB3P0DN86 165 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 CGB7P0DN87 165 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 PRKACAP17612 351 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 MYCNOSP40205 109 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 KIR3DL2P43630 455 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 POU3F4P49335 361 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 DGCR2P98153 550 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 AESQ08117 197 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 DIAPH2-AS1Q14236 149 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 OR52W1Q6IF63 320 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 ENTHD1Q8IYW4 607 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 TCEANCQ8N8B7 351 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 CAPSLQ8WWF8 208 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 DPF1Q92782 380 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 BORCS8Q96FH0 119 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 RAX2Q96IS3 184 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 NSL1Q96IY1 281 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 MNTQ99583 582 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 TBX5Q99593 518 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 PAPOLBQ9NRJ5 636 aaKnown RBP9.37□□□□□ -0.91
BRCA1-225ENST00000586385 TAS2R3Q9NYW6 316 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 MOB4Q9Y3A3 225 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 HSPE1-MOB4S4R3N1 261 aa9.37□□□□□ -0.91
BRCA1-225ENST00000586385 TRGV10A0A0A0MS01 117 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 LOC107986453A0A1B0GWG9 222 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 A0A1W2PQL4 384 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-225ENST00000586385 ODAMA1E959 279 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 AQP12BA6NM10 295 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 H3BUI4 141 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 M0QZK8 103 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 GATBO75879 557 aaKnown RBP9.36□□□□□ -0.91
BRCA1-225ENST00000586385 APOL3O95236 402 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 NHLRC4P0CG21 123 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-225ENST00000586385 LMO1P25800 156 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 LUMP51884 338 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-225ENST00000586385 MNAT1P51948 309 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 ISL1P61371 349 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 SPIN3Q5JUX0 258 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 NXNL2Q5VZ03 156 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 C12orf73Q69YU5 71 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 Q6P435 159 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 THNSL2Q86YJ6 484 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 AQP12AQ8IXF9 295 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 Q8IYB0 196 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 C5orf56Q8N8D9 126 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 YIPF7Q8N8F6 280 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 DNAAF1Q8NEP3 725 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 OR51D1Q8NGF3 324 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 OR56B4Q8NH76 319 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 TMEM163Q8TC26 289 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 LRGUKQ96M69 825 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 PRR25Q96S07 402 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 MCRIP2Q9BUT9 160 aaKnown RBP9.36□□□□□ -0.91
BRCA1-225ENST00000586385 COMMD4Q9H0A8 199 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 PPIL3Q9H2H8 161 aaKnown RBP9.36□□□□□ -0.91
BRCA1-225ENST00000586385 GAL3ST2Q9H3Q3 398 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 PLEKHA1Q9HB21 404 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 GSTK1Q9Y2Q3 226 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 PCDHGB5Q9Y5G0 923 aa9.36□□□□□ -0.91
BRCA1-225ENST00000586385 OOSP1A8MZH6 123 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 FKBP6O75344 327 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 CSN2P05814 226 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 ATF1P18846 271 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 RBP2P50120 134 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 CDC42P60953 191 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 ACTR3P61158 418 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 CBX1P83916 185 aa9.35□□□□□ -0.91
BRCA1-225ENST00000586385 PDZK1IP1Q13113 114 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms