RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ERVK11-1P61568 191 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 ZNF146Q15072 292 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 CDNFQ49AH0 187 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 OLFML2AQ68BL7 652 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 TGIF2LYQ8IUE0 185 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 FAM58AQ8N1B3 248 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 ENKURQ8TC29 256 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 ELMOD3Q96FG2 381 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 MSL2Q9HCI7 577 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 C12orf4Q9NQ89 552 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 PLEKHJ1Q9NW61 149 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 RCC2Q9P258 522 aaKnown RBP10.67□□□□□ -0.7
VMP1-202ENST00000585847 ANAPC10Q9UM13 185 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 NPTNQ9Y639 398 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 CACNG2Q9Y698 323 aa10.67□□□□□ -0.7
VMP1-202ENST00000585847 IGKV1-12A0A0C4DH73 117 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 LRRC30A6NM36 301 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 C17orf100A8MU93 164 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 SPRY1O43609 319 aaPredicted RBP10.66□□□□□ -0.7
VMP1-202ENST00000585847 ANGPTL7O43827 346 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 KNG1P01042 644 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 IGKV1D-12P01611 117 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 IGHV1-46P01743 117 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 CHATP28329 748 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 RAG2P55895 527 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 TAS2R46P59540 309 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 DGCR2P98153 550 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 IFITM3Q01628 133 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 KLF9Q13886 244 aaPredicted RBP10.66□□□□□ -0.7
VMP1-202ENST00000585847 OR10K2Q6IF99 312 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 DCDC5Q6ZRR9 648 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 MOB1BQ7L9L4 216 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 C1QL2Q7Z5L3 287 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 TMEM229BQ8NBD8 167 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 SCCPDHQ8NBX0 429 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 DUSP18Q8NEJ0 188 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 OR11L1Q8NGX0 322 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 OR52I2Q8NH67 350 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 NINJ1Q92982 152 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 MBD6Q96DN6 1003 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 SEH1LQ96EE3 360 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 FOXC2Q99958 501 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 OCSTAMPQ9BR26 566 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 FGF23Q9GZV9 251 aaPredicted RBP10.66□□□□□ -0.7
VMP1-202ENST00000585847 HES4Q9HCC6 221 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 IFT46Q9NQC8 304 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 TBC1D24Q9ULP9 559 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 TANC2Q9HCD6 1990 aa10.66□□□□□ -0.7
VMP1-202ENST00000585847 NAV3Q8IVL0 2385 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 FAM240BA0A1B0GVZ2 78 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 ORC5O43913 435 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 FSTL3O95633 263 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 DIRAS3O95661 229 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 SFTPBP07988 381 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 AKAIN1P0CW23 69 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 HOXB4P17483 251 aaPredicted RBP10.65□□□□□ -0.7
VMP1-202ENST00000585847 NAT1P18440 290 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 SLC6A1P30531 599 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 RBMXP38159 391 aaKnown RBP10.65□□□□□ -0.7
VMP1-202ENST00000585847 SNRPD2P62316 118 aaKnown RBP10.65□□□□□ -0.7
VMP1-202ENST00000585847 PAX5Q02548 391 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 PLET1Q6UQ28 207 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 Q6ZNX1 250 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 Q6ZS49 121 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 KRTAP1-3Q8IUG1 177 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 C1orf87Q8N0U7 546 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 CENPSQ8N2Z9 138 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 OR2Z1Q8NG97 314 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 EMG1Q92979 244 aaKnown RBP10.65□□□□□ -0.7
VMP1-202ENST00000585847 DVL3Q92997 716 aaPredicted RBP10.65□□□□□ -0.7
VMP1-202ENST00000585847 SLAMF9Q96A28 289 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 CREB3L1Q96BA8 519 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 MEGF10Q96KG7 1140 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 DPAGT1Q9H3H5 408 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 BANF2Q9H503 90 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 MTCH1Q9NZJ7 389 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 ARID1AO14497 2285 aa10.65□□□□□ -0.7
VMP1-202ENST00000585847 PRRC2AP48634 2157 aaKnown RBP10.65□□□□□ -0.71
VMP1-202ENST00000585847 A6NLC8 198 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 ZNF736B4DX44 427 aaPredicted RBP10.64□□□□□ -0.71
VMP1-202ENST00000585847 SPRY3O43610 288 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 OR7C1O76099 320 aaPredicted RBP10.64□□□□□ -0.71
VMP1-202ENST00000585847 LY6HO94772 140 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 NXPH2O95156 264 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 PLATP00750 562 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 IGHV4-39P01824 125 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 CD74P04233 296 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 CD3GP09693 182 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 IRF2P14316 349 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 GABRR1P24046 479 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 DNASE1P24855 282 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 ECI1P42126 302 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 TNFAIP6P98066 277 aaPredicted RBP10.64□□□□□ -0.71
VMP1-202ENST00000585847 PLA2G7Q13093 441 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 ARFRP1Q13795 201 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 DEFB113Q30KQ7 82 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 BIVMQ86UB2 503 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 IZUMO1Q8IYV9 350 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 ARRDC1Q8N5I2 433 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 OR10AD1Q8NGE0 317 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms