RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 TMEM210A6NLX4 147 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 DBX1A6NMT0 343 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 POM121CA8CG34 1229 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 SDCBPO00560 298 aaPredicted RBP9.65□□□□□ -0.86
LIG3-204ENST00000585740 RP2O75695 350 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 IGKV3-15P01624 115 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 OR5H8P0DN80 308 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 S100A11P31949 105 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 HTR2BP41595 481 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 OR2T2Q6IF00 324 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 DHRS11Q6UWP2 260 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 FAM169BQ8N8A8 192 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 CASTOR1Q8WTX7 329 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 MAFIPQ8WZ33 124 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 TMEM230Q96A57 120 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 ZNF2Q9BSG1 426 aaPredicted RBP9.65□□□□□ -0.86
LIG3-204ENST00000585740 RTBDNQ9BSG5 229 aaPredicted RBP9.65□□□□□ -0.86
LIG3-204ENST00000585740 DPCDQ9BVM2 203 aaPredicted RBP9.65□□□□□ -0.86
LIG3-204ENST00000585740 FGF23Q9GZV9 251 aaPredicted RBP9.65□□□□□ -0.86
LIG3-204ENST00000585740 FXYD6Q9H0Q3 95 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 RCC2Q9P258 522 aaKnown RBP9.65□□□□□ -0.86
LIG3-204ENST00000585740 UBQLN2Q9UHD9 624 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 POLDIP2Q9Y2S7 368 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 MAB21L2Q9Y586 359 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.64□□□□□ -0.87
LIG3-204ENST00000585740 LRP5LA4QPB2 252 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 IQCF6A8MYZ5 107 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 ARPC5O15511 151 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 CXCL2P19875 107 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 IL32P24001 234 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 SSTR2P30874 369 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 NPBWR2P48146 333 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 UCP2P55851 309 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 UCP3P55916 312 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 SORDQ00796 357 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 RBM39Q14498 530 aaKnown RBP9.64□□□□□ -0.87
LIG3-204ENST00000585740 C1orf185Q5T7R7 199 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 ZNF660Q6AZW8 331 aaPredicted RBP9.64□□□□□ -0.87
LIG3-204ENST00000585740 VWA1Q6PCB0 445 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 HAGHLQ6PII5 290 aaPredicted RBP9.64□□□□□ -0.87
LIG3-204ENST00000585740 PCSK4Q6UW60 755 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 CLEC18BQ6UXF7 455 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 TMUB2Q71RG4 321 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 KCTD9Q7L273 389 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 SGPP2Q8IWX5 399 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 RBMXL3Q8N7X1 1067 aaKnown RBP9.64□□□□□ -0.87
LIG3-204ENST00000585740 WDR31Q8NA23 367 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 NAXEQ8NCW5 288 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 EXTL1Q92935 676 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 PIK3IP1Q96FE7 263 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 VRK1Q99986 396 aaPredicted RBP9.64□□□□□ -0.87
LIG3-204ENST00000585740 HDHD3Q9BSH5 251 aaPredicted RBP9.64□□□□□ -0.87
LIG3-204ENST00000585740 BCL2L14Q9BZR8 327 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 NMES1Q9C002 83 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 OR51I2Q9H344 312 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 IFT22Q9H7X7 185 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 CHMP1AQ9HD42 196 aaPredicted RBP9.64□□□□□ -0.87
LIG3-204ENST00000585740 C1orf123Q9NWV4 160 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 ESPL1Q14674 2120 aa9.64□□□□□ -0.87
LIG3-204ENST00000585740 INTS1Q8N201 2190 aaKnown RBP9.63□□□□□ -0.87
LIG3-204ENST00000585740 IGKV1D-8A0A087WSZ0 117 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 TRAV14DV4A0A0A6YYC5 116 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 TRBV6-6A0A0A6YYG2 114 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 KIR2DS1A0A191URI9 304 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 C5orf51A6NDU8 294 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 TNFSF13O75888 250 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 OR2F2O95006 317 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 CGAP01215 116 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 CELA3BP08861 270 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 CTXN2P0C2S0 81 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 PRKACAP17612 351 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 CA6P23280 308 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 CALCRP30988 508 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 OPRM1P35372 400 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 TIMP3P35625 211 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 RBMXP38159 391 aaKnown RBP9.63□□□□□ -0.87
LIG3-204ENST00000585740 KIR2DS4P43632 304 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 RAB14P61106 215 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 HERV-K104P61576 105 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 MZT1Q08AG7 82 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 OR2F1Q13607 317 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 ZNF345Q14585 488 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 KIR2DS1Q14954 304 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 C3orf36Q3SXR2 165 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 C11orf87Q6NUJ2 197 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 SLC22A25Q6T423 547 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 FAM180AQ6UWF9 173 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 BHLHA15Q7RTS1 189 aaPredicted RBP9.63□□□□□ -0.87
LIG3-204ENST00000585740 FAM58AQ8N1B3 248 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 CCDC71LQ8N9Z2 235 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 OR1J1Q8NGS3 322 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 THAP6Q8TBB0 222 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 SLC25A40Q8TBP6 338 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 STARD4Q96DR4 205 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 WDR89Q96FK6 387 aaPredicted RBP9.63□□□□□ -0.87
LIG3-204ENST00000585740 SLX1AQ9BQ83 275 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 SYT3Q9BQG1 590 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 MFFQ9GZY8 342 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 OR51B6Q9H340 312 aa9.63□□□□□ -0.87
LIG3-204ENST00000585740 ZNF71Q9NQZ8 489 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms