RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 TSPAN4O14817 238 aa13.52□□□□□ -0.25
TVP23C-210ENST00000584811 BET1O15155 118 aa13.52□□□□□ -0.25
TVP23C-210ENST00000584811 CA11O75493 328 aa13.52□□□□□ -0.25
TVP23C-210ENST00000584811 SCTP09683 121 aa13.52□□□□□ -0.25
TVP23C-210ENST00000584811 CYCSP99999 105 aaKnown RBP13.52□□□□□ -0.25
TVP23C-210ENST00000584811 OR2T2Q6IF00 324 aa13.52□□□□□ -0.25
TVP23C-210ENST00000584811 DHRS11Q6UWP2 260 aa13.52□□□□□ -0.25
TVP23C-210ENST00000584811 SHARPINQ9H0F6 387 aa13.52□□□□□ -0.25
TVP23C-210ENST00000584811 SESN1Q9Y6P5 492 aa13.52□□□□□ -0.25
TVP23C-210ENST00000584811 ARHGAP21Q5T5U3 1957 aa13.52□□□□□ -0.25
TVP23C-210ENST00000584811 GTF3C1Q12789 2109 aa13.52□□□□□ -0.25
TVP23C-210ENST00000584811 RPL36A-HNRNPH2H7BZ11 118 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 ZNF806P0C7X5 589 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 FUT3P21217 361 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 ERVS71-1P61550 626 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 ARL6IP1Q15041 203 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 HAGHLQ6PII5 290 aaPredicted RBP13.51□□□□□ -0.25
TVP23C-210ENST00000584811 HSD17B13Q7Z5P4 300 aaPredicted RBP13.51□□□□□ -0.25
TVP23C-210ENST00000584811 BAP18Q8IXM2 172 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 DEFB124Q8NES8 71 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 EXTL1Q92935 676 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 PARP12Q9H0J9 701 aaKnown RBP13.51□□□□□ -0.25
TVP23C-210ENST00000584811 TMEM231Q9H6L2 316 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 C12orf4Q9NQ89 552 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 TRAV39A0A0B4J263 110 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 RHBDL1O75783 438 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 C20orf204Q6ZNR8 217 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 SPERTQ8NA61 448 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 ZFP62Q8NB50 900 aaPredicted RBP13.51□□□□□ -0.25
TVP23C-210ENST00000584811 WDYHV1Q96HA8 205 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 LOXL4Q96JB6 756 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 DECR2Q9NUI1 292 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 C1orf123Q9NWV4 160 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 ZNF391Q9UJN7 358 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 BSNQ9UPA5 3926 aa13.51□□□□□ -0.25
TVP23C-210ENST00000584811 TNRC6AQ8NDV7 1962 aaKnown RBP13.5□□□□□ -0.25
TVP23C-210ENST00000584811 B8ZZF3 427 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 LINC01387J3KSC0 135 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 DTYMKP23919 212 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 CCL11P51671 97 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 PPA1Q15181 289 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 SURF2Q15527 256 aaPredicted RBP13.5□□□□□ -0.25
TVP23C-210ENST00000584811 ABCA11PQ4W5N1 156 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 ZNF766Q5HY98 468 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 MEX3BQ6ZN04 569 aaKnown RBP13.5□□□□□ -0.25
TVP23C-210ENST00000584811 OR52M1Q8NGK5 317 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 SLC5A7Q9GZV3 580 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 EDARQ9UNE0 448 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 KLF13Q9Y2Y9 288 aaPredicted RBP13.5□□□□□ -0.25
TVP23C-210ENST00000584811 CD300LBA8K4G0 201 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 KLRC4-KLRK1H3BQV0 150 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 HS3ST1O14792 307 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 ACTL6AO96019 429 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 HKR1P10072 659 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 CA6P23280 308 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 ID4P47928 161 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 CLN3Q13286 438 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 PLEKHN1Q494U1 663 aaPredicted RBP13.5□□□□□ -0.25
TVP23C-210ENST00000584811 MDP1Q86V88 176 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 CPNE2Q96FN4 548 aaPredicted RBP13.5□□□□□ -0.25
TVP23C-210ENST00000584811 TP53RKQ96S44 253 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 ADAT1Q9BUB4 502 aaKnown RBP13.5□□□□□ -0.25
TVP23C-210ENST00000584811 PARD6AQ9NPB6 346 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 SLC33A1O00400 549 aaPredicted RBP13.5□□□□□ -0.25
TVP23C-210ENST00000584811 FBXO24O75426 580 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 TMEM187Q14656 261 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 ZDHHC23Q8IYP9 409 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 UBALD1Q8TB05 177 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 GLYATL2Q8WU03 294 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 APOBEC3DQ96AK3 386 aaPredicted RBP13.5□□□□□ -0.25
TVP23C-210ENST00000584811 FER1L6-AS2Q96M78 137 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 ZC4H2Q9NQZ6 224 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 IL36GQ9NZH8 169 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 PLA2G2EQ9NZK7 142 aa13.5□□□□□ -0.25
TVP23C-210ENST00000584811 KIAA2026Q5HYC2 2103 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 DEFA5Q01523 94 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 HERPUD1Q15011 391 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 ALKBH6Q3KRA9 238 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 RTL6Q6ICC9 239 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 NEK7Q8TDX7 302 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 RDH5Q92781 318 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 ERGIC1Q969X5 290 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 ZNF286AQ9HBT8 521 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 LHX6Q9UPM6 363 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 ADGRG4Q8IZF6 3080 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 TRGV5A0A0B4J1U4 118 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 ZNF724A8MTY0 619 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 LRP3O75074 770 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 TPT1P13693 172 aaKnown RBP13.49□□□□□ -0.25
TVP23C-210ENST00000584811 ASCL1P50553 236 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 CEACAM21Q3KPI0 293 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 NRN1LQ496H8 165 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 CNTNAP3BQ96NU0 1288 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 CNTNAP3Q9BZ76 1288 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 NAA60Q9H7X0 242 aa13.49□□□□□ -0.25
TVP23C-210ENST00000584811 IGKV1D-13A0A0B4J2D9 117 aa13.48□□□□□ -0.25
TVP23C-210ENST00000584811 LOC105371267A0A1B0GV96 52 aa13.48□□□□□ -0.25
TVP23C-210ENST00000584811 SLC22A20A6NK97 555 aa13.48□□□□□ -0.25
TVP23C-210ENST00000584811 PHF1O43189 567 aaPredicted RBP13.48□□□□□ -0.25
TVP23C-210ENST00000584811 LYZL6O75951 148 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms