RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 NR1H4Q96RI1 486 aaPredicted RBP6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 FEVQ99581 238 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 TEAD3Q99594 435 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 NRIP2Q9BQI9 281 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 PBOV1Q9GZY1 135 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 MAGIXQ9H6Y5 334 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 HES4Q9HCC6 221 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 PPP1R14DQ9NXH3 145 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 ACTR3BQ9P1U1 418 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 ENPP5Q9UJA9 477 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 LAMP5Q9UJQ1 280 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 COPS3Q9UNS2 423 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 PCDHGB5Q9Y5G0 923 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 HILPDAQ9Y5L2 63 aa6.24□□□□□ -1.41
SMCHD1-210ENST00000583800 PQLC2LA1A4F0 135 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 A6NIN4 97 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 K7N7A8 449 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 SNX3O60493 162 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 NOS1APO75052 506 aaPredicted RBP6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 DHRS3O75911 302 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 TTRP02766 147 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 ALDOBP05062 364 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF728P0DKX0 622 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 IGHV1-8P0DP01 117 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 SLC2A5P22732 501 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 HOXD3P31249 432 aaPredicted RBP6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 DYNLT3P51808 116 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 OR12D2P58182 307 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 COL10A1Q03692 680 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 ZIK1Q3SY52 487 aaPredicted RBP6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 DEFB121Q5J5C9 76 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 TCTEX1D4Q5JR98 221 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 SLC35D3Q5M8T2 416 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 LCN8Q6JVE9 175 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 C10orf99Q6UWK7 81 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 ASRGL1Q7L266 308 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 TMEM179BQ7Z7N9 219 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF573Q86YE8 665 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 CALHM1Q8IU99 346 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 TPRX1Q8N7U7 411 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 OR11H6Q8NGC7 330 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 NDNFQ8TB73 568 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 GIPC3Q8TF64 312 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 MROQ9BYG7 248 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 LIN7CQ9NUP9 197 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 NUFIP1Q9UHK0 495 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 SLC22A13Q9Y226 551 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 POLDIP2Q9Y2S7 368 aa6.23□□□□□ -1.41
SMCHD1-210ENST00000583800 IGHV2-26A0A0B4J1V2 119 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 TCRBV4S1A1TA0A5B7 111 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 CCDC182A6NF36 153 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ACOD1A6NK06 481 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 SH2D7A6NKC9 451 aaPredicted RBP6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 F8VVB4 439 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 F8VWA3 439 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF737O75373 536 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 RBP4P02753 201 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 CD24P25063 80 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 MPZP25189 248 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ERVK11-1P61568 191 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ESRRGP62508 458 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ACTA2P62736 377 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ACTG2P63267 376 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ACTC1P68032 377 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ACTA1P68133 377 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 APOFQ13790 326 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 EDDM3AQ14507 147 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF829Q3KNS6 432 aaPredicted RBP6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 SPATS1Q496A3 300 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 FAM98BQ52LJ0 330 aaKnown RBP6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 HSP90B2PQ58FF3 399 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 CLVS2Q5SYC1 327 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 TMEM42Q69YG0 159 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 KCTD18Q6PI47 426 aaPredicted RBP6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 DEGS2Q6QHC5 323 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 PLEKHG7Q6ZR37 379 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 GDPD3Q7L5L3 318 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ANGPTL5Q86XS5 388 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 HS3ST5Q8IZT8 346 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF676Q8N7Q3 588 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 OR8H1Q8NGG4 311 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 TRMT10AQ8TBZ6 339 aaKnown RBP6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 MYDGFQ969H8 173 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 SLC7A6OSQ96CW6 309 aaPredicted RBP6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 ZNF714Q96N38 554 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 YIPF3Q9GZM5 350 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 INPP5EQ9NRR6 644 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 NDE1Q9NXR1 346 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 IKZF2Q9UKS7 526 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 TSSC4Q9Y5U2 329 aaPredicted RBP6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 RYR2Q92736 4967 aa6.22□□□□□ -1.41
SMCHD1-210ENST00000583800 FAM230AA0A1W2PPH8 454 aa6.21□□□□□ -1.42
SMCHD1-210ENST00000583800 ARRDC5A6NEK1 342 aa6.21□□□□□ -1.42
SMCHD1-210ENST00000583800 FAM90A22PA8MWA6 464 aa6.21□□□□□ -1.42
SMCHD1-210ENST00000583800 H3BSH0 61 aa6.21□□□□□ -1.42
SMCHD1-210ENST00000583800 DLGAP1O14490 977 aa6.21□□□□□ -1.42
SMCHD1-210ENST00000583800 MAGEB4O15481 346 aaPredicted RBP6.21□□□□□ -1.42
SMCHD1-210ENST00000583800 SRSF10O75494 262 aaKnown RBP6.21□□□□□ -1.42
SMCHD1-210ENST00000583800 MMP23AO75900 390 aa6.21□□□□□ -1.42
SMCHD1-210ENST00000583800 CST1P01037 141 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms