RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 GMDSO60547 372 aa16.85■□□□□ 0.29
SRSF1-206ENST00000583741 ALX3O95076 343 aa16.85■□□□□ 0.29
SRSF1-206ENST00000583741 NRASP01111 189 aa16.85■□□□□ 0.29
SRSF1-206ENST00000583741 CA6P23280 308 aa16.85■□□□□ 0.29
SRSF1-206ENST00000583741 CNN3Q15417 329 aaKnown RBP16.85■□□□□ 0.29
SRSF1-206ENST00000583741 GLT8D1Q68CQ7 371 aa16.85■□□□□ 0.29
SRSF1-206ENST00000583741 LDLRAD3Q86YD5 345 aa16.85■□□□□ 0.29
SRSF1-206ENST00000583741 PDZD9Q8IXQ8 264 aa16.85■□□□□ 0.29
SRSF1-206ENST00000583741 PNLDC1Q8NA58 520 aaKnown RBP16.85■□□□□ 0.29
SRSF1-206ENST00000583741 MCFD2Q8NI22 146 aa16.85■□□□□ 0.29
SRSF1-206ENST00000583741 FN3KRPQ9HA64 309 aa16.85■□□□□ 0.29
SRSF1-206ENST00000583741 IGKV1-9A0A0C4DH69 117 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 MAGEB3O15480 346 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 PTBP3O95758 552 aaKnown RBP16.84■□□□□ 0.29
SRSF1-206ENST00000583741 CST4P01036 141 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 HCKP08631 526 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 ATF1P18846 271 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 ARF6P62330 175 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 OR8G1Q15617 311 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 IDNKQ5T6J7 187 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 DDI2Q5TDH0 399 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 Q6ZSV7 163 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 KRT74Q7RTS7 529 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 PIP4P2Q8N4L2 257 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 AP3S1Q92572 193 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 ADAT1Q9BUB4 502 aaKnown RBP16.84■□□□□ 0.29
SRSF1-206ENST00000583741 DAPK2Q9UIK4 370 aa16.84■□□□□ 0.29
SRSF1-206ENST00000583741 IFITM5A6NNB3 132 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 ZNF850A8MQ14 1090 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 AZGP1P25311 298 aaKnown RBP16.83■□□□□ 0.28
SRSF1-206ENST00000583741 PRDX4Q13162 271 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 KCNJ8Q15842 424 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 DMRTC1Q5HYR2 192 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 PLCXD3Q63HM9 321 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 JAGN1Q8N5M9 183 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 ZSCAN4Q8NAM6 433 aaPredicted RBP16.83■□□□□ 0.28
SRSF1-206ENST00000583741 SCCPDHQ8NBX0 429 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 OR52N4Q8NGI2 321 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 FAM110DQ8TAY7 271 aaPredicted RBP16.83■□□□□ 0.28
SRSF1-206ENST00000583741 NPRL2Q8WTW4 380 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 NXF2Q9GZY0 626 aaKnown RBP16.83■□□□□ 0.28
SRSF1-206ENST00000583741 PLGRKTQ9HBL7 147 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 NEK6Q9HC98 313 aa16.83■□□□□ 0.28
SRSF1-206ENST00000583741 MRPL15Q9P015 296 aaKnown RBP16.83■□□□□ 0.28
SRSF1-206ENST00000583741 OOEPA6NGQ2 149 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 AIPO00170 330 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 GYPAP02724 150 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 ALDOBP05062 364 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 SLC2A2P11168 524 aaPredicted RBP16.82■□□□□ 0.28
SRSF1-206ENST00000583741 HES5Q5TA89 166 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 MOB3CQ70IA8 216 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 BTN2A1Q7KYR7 527 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 ZDHHC23Q8IYP9 409 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 SPSB1Q96BD6 273 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 FOXRED1Q96CU9 486 aaPredicted RBP16.82■□□□□ 0.28
SRSF1-206ENST00000583741 PPP1R3EQ9H7J1 279 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 SLC7A11Q9UPY5 501 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 MPC1Q9Y5U8 109 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 A3GALT2U3KPV4 340 aa16.82■□□□□ 0.28
SRSF1-206ENST00000583741 A0A075B6Q4 140 aa16.81■□□□□ 0.28
SRSF1-206ENST00000583741 PRKACBP22694 351 aa16.81■□□□□ 0.28
SRSF1-206ENST00000583741 ZNF93P35789 620 aaPredicted RBP16.81■□□□□ 0.28
SRSF1-206ENST00000583741 ZNF826PQ6ZT77 177 aa16.81■□□□□ 0.28
SRSF1-206ENST00000583741 FAM90A1Q86YD7 464 aa16.81■□□□□ 0.28
SRSF1-206ENST00000583741 CDH26Q8IXH8 852 aa16.81■□□□□ 0.28
SRSF1-206ENST00000583741 FGFRL1Q8N441 504 aa16.81■□□□□ 0.28
SRSF1-206ENST00000583741 TRMT10AQ8TBZ6 339 aaKnown RBP16.81■□□□□ 0.28
SRSF1-206ENST00000583741 KCTD12Q96CX2 325 aaKnown RBP16.81■□□□□ 0.28
SRSF1-206ENST00000583741 SPACA5Q96QH8 159 aa16.81■□□□□ 0.28
SRSF1-206ENST00000583741 C6orf62Q9GZU0 229 aaPredicted RBP16.81■□□□□ 0.28
SRSF1-206ENST00000583741 C1orf123Q9NWV4 160 aa16.81■□□□□ 0.28
SRSF1-206ENST00000583741 TET2Q6N021 2002 aaPredicted RBP16.81■□□□□ 0.28
SRSF1-206ENST00000583741 TRAV38-1A0A0B4J264 116 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 SLC17A2O00624 439 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 DVL1O14640 695 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 TMEM127O75204 238 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 CD37P11049 281 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 GCSAMQ8N6F7 178 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 ACOT12Q8WYK0 555 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 CPNE2Q96FN4 548 aaPredicted RBP16.8■□□□□ 0.28
SRSF1-206ENST00000583741 NKX3-1Q99801 234 aaPredicted RBP16.8■□□□□ 0.28
SRSF1-206ENST00000583741 SLC22A4Q9H015 551 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 A0A1B0GW55 424 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 FAM230AA0A1W2PPH8 454 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 NDUFA2O43678 99 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 DUX4L2P0CJ85 424 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 DUX4L3P0CJ86 424 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 DUX4L4P0CJ87 422 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 DUX4L5P0CJ88 424 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 DUX4L6P0CJ89 424 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 DUX4L7P0CJ90 424 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 KISS1Q15726 138 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 C1orf100Q5SVJ3 147 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 DUX4L9Q6RFH8 374 aaPredicted RBP16.8■□□□□ 0.28
SRSF1-206ENST00000583741 VMO1Q7Z5L0 202 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 LYPD6Q86Y78 171 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 OR6M1Q8NGM8 313 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 BORCS8Q96FH0 119 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 HIST1H2AAQ96QV6 131 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 GPER1Q99527 375 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms