RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 DGCR2P98153 550 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 ZNF829Q3KNS6 432 aaPredicted RBP9.83□□□□□ -0.84
TOP3A-215ENST00000583328 CEACAM21Q3KPI0 293 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 DMRTC1Q5HYR2 192 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 C6orf141Q5SZD1 244 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 ZNF684Q5T5D7 378 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 MINOS1Q5TGZ0 78 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 MOB3CQ70IA8 216 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 FAM220AQ7Z4H9 259 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 YIPF7Q8N8F6 280 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 OR11H6Q8NGC7 330 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 OR51D1Q8NGF3 324 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 NDNFQ8TB73 568 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 AKR1E2Q96JD6 320 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 CNBD2Q96M20 576 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 ZNF488Q96MN9 340 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 ZNF649Q9BS31 505 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 DIMT1Q9UNQ2 313 aaKnown RBP9.83□□□□□ -0.84
TOP3A-215ENST00000583328 MINOS1-NBL1R4GNA1 71 aa9.83□□□□□ -0.84
TOP3A-215ENST00000583328 TMEM269A0A1B0GVZ9 245 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 MEX3AA1L020 520 aaKnown RBP9.82□□□□□ -0.84
TOP3A-215ENST00000583328 METTL15A6NJ78 407 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 ACOD1A6NK06 481 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 FAM90A22PA8MWA6 464 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 MAGEB4O15481 346 aaPredicted RBP9.82□□□□□ -0.84
TOP3A-215ENST00000583328 TK1P04183 234 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 ZNF728P0DKX0 622 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 MAP2K3P46734 347 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 GALEQ14376 348 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 C10orf99Q6UWK7 81 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 C16orf82Q7Z2V1 217 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 KCTD20Q7Z5Y7 419 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 EGFL6Q8IUX8 553 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 POC1AQ8NBT0 407 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 BPIFB6Q8NFQ5 453 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 OR5A2Q8NGI9 324 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 GGHQ92820 318 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 TMEM80Q96HE8 168 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 ALG8Q9BVK2 526 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 MOB1AQ9H8S9 216 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 FAM206AQ9NX38 181 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 ERVK13-1Q9NX77 482 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 SCN3BQ9NY72 215 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 OR14J1Q9UGF5 321 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 PSORS1C1Q9UIG5 152 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 GNG8Q9UK08 70 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 R4GMQ9 66 aa9.82□□□□□ -0.84
TOP3A-215ENST00000583328 OR5B21A6NL26 309 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 LOC110117498-PIK3R3F6TDL0 507 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 DENRO43583 198 aaKnown RBP9.81□□□□□ -0.84
TOP3A-215ENST00000583328 SRSF10O75494 262 aaKnown RBP9.81□□□□□ -0.84
TOP3A-215ENST00000583328 ZFPL1O95159 310 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 IGHV1-8P0DP01 117 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 MYL12AP19105 171 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 ST3GAL4Q11206 333 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 MED21Q13503 144 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 DOC2BQ14184 412 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 ABCA11PQ4W5N1 156 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 TP53I3Q53FA7 332 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 AHSA2Q719I0 299 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 LHFPL3Q86UP9 236 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 SYS1Q8N2H4 156 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 OR8B12Q8NGG6 310 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 ASCL2Q99929 193 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 FKBP14Q9NWM8 211 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 NUFIP1Q9UHK0 495 aaKnown RBP9.81□□□□□ -0.84
TOP3A-215ENST00000583328 EXOSC1Q9Y3B2 195 aaKnown RBP9.81□□□□□ -0.84
TOP3A-215ENST00000583328 SNX5Q9Y5X3 404 aa9.81□□□□□ -0.84
TOP3A-215ENST00000583328 RPP14O95059 124 aaKnown RBP9.8□□□□□ -0.84
TOP3A-215ENST00000583328 NXPH2O95156 264 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 RBP4P02753 201 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 LIMS3P0CW19 117 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 LIMS4P0CW20 117 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 PGA5P0DJD9 388 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 CD24P25063 80 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 THBS3P49746 956 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 EDDM3BP56851 147 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 MFGE8Q08431 387 aaPredicted RBP9.8□□□□□ -0.84
TOP3A-215ENST00000583328 PLCXD3Q63HM9 321 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 ETV3LQ6ZN32 361 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 BATF2Q8N1L9 274 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 STX19Q8N4C7 294 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 ASCC1Q8N9N2 400 aaKnown RBP9.8□□□□□ -0.84
TOP3A-215ENST00000583328 HAVCR2Q8TDQ0 301 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 C4orf36Q96KX1 117 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 PBOV1Q9GZY1 135 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 LIN7BQ9HAP6 207 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 CHCHD3Q9NX63 227 aaKnown RBP9.8□□□□□ -0.84
TOP3A-215ENST00000583328 BLOC1S6Q9UL45 172 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 TPRKBQ9Y3C4 175 aa9.8□□□□□ -0.84
TOP3A-215ENST00000583328 A0A0U1RQV5 110 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 SH2D7A6NKC9 451 aaPredicted RBP9.79□□□□□ -0.84
TOP3A-215ENST00000583328 J3QLW9 94 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 K7N7A8 449 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 RAMP3O60896 148 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 TTRP02766 147 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 ZNF19P17023 458 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 BRS3P32247 399 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 HAAOP46952 286 aa9.79□□□□□ -0.84
TOP3A-215ENST00000583328 ETV1P50549 477 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms