RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 FAM19A1Q7Z5A9 133 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 GALNT10Q86SR1 603 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 LRP11Q86VZ4 500 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 DRAXINQ8NBI3 349 aaPredicted RBP2.58□□□□□ -2
SMARCE1-219ENST00000583294 OR8A1Q8NGG7 326 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 CMTM2Q8TAZ6 248 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 CIDECQ96AQ7 238 aaPredicted RBP2.58□□□□□ -2
SMARCE1-219ENST00000583294 ZNF75AQ96N20 296 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 PKMYT1Q99640 499 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 ANAPC13Q9BS18 74 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 PRRG3Q9BZD7 231 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 ULBP1Q9BZM6 244 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 TSGA10Q9BZW7 698 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 NXF2Q9GZY0 626 aaKnown RBP2.58□□□□□ -2
SMARCE1-219ENST00000583294 POMKQ9H5K3 350 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 SLC22A14Q9Y267 594 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 ZBED9Q6R2W3 1325 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 A0A0B4J2C4 111 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 RAB19A4D1S5 217 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 ZNF729A6NN14 1252 aaPredicted RBP2.57□□□□□ -2
SMARCE1-219ENST00000583294 CPSF4O95639 269 aaKnown RBP2.57□□□□□ -2
SMARCE1-219ENST00000583294 SOD3P08294 240 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 CCDC172P0C7W6 258 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 MLNP12872 115 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 FOXA1P55317 472 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 C2orf80Q0P641 193 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 LGALSLQ3ZCW2 172 aaPredicted RBP2.57□□□□□ -2
SMARCE1-219ENST00000583294 ZFP82Q8N141 532 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 MUC7Q8TAX7 377 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 LGALS14Q8TCE9 139 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 TWIST2Q8WVJ9 160 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 GLT1D1Q96MS3 346 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 TXNIPQ9H3M7 391 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 RBMX2Q9Y388 322 aaKnown RBP2.57□□□□□ -2
SMARCE1-219ENST00000583294 NACADO15069 1562 aa2.57□□□□□ -2
SMARCE1-219ENST00000583294 MGAT4DA6NG13 374 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 D6RAR5 112 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 NDUFS8O00217 210 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 FFAR1O14842 300 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 AQP9O43315 295 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 IGKV1D-33P01593 117 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 IGKV1-33P01594 117 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 GIMD1P0DJR0 217 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 SCGB1C2P0DMR2 95 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 CCNOP22674 350 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 DSTNP60981 165 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 TNXAQ16473 311 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 ERICH5Q6P6B1 374 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 EIF4E3Q8N5X7 224 aaKnown RBP2.56□□□□□ -2
SMARCE1-219ENST00000583294 OR8G5Q8NG78 346 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 SCGB1C1Q8TD33 95 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 CCL17Q92583 94 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 LINC01587Q99440 93 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 GABARAPL1Q9H0R8 117 aa2.56□□□□□ -2
SMARCE1-219ENST00000583294 MCTS1Q9ULC4 181 aaKnown RBP2.56□□□□□ -2
SMARCE1-219ENST00000583294 IGHV3-21A0A0B4J1V1 117 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 IGHV3-43A0A0B4J1X8 118 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 A8MWP4 228 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 LEUTXA8MZ59 168 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 F5H5P2 479 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 H3BP45 60 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 PSIP1O75475 530 aaKnown RBP2.55□□□□□ -2
SMARCE1-219ENST00000583294 IGHV3-53P01767 116 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 IGKV5-2P06315 115 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 PRTN3P24158 256 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 TGFBR2P37173 567 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 VAMP3Q15836 100 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 TPGS1Q6ZTW0 290 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 DPPA2Q7Z7J5 298 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 NLRC5Q86WI3 1866 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 CPNE9Q8IYJ1 553 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 LRRC20Q8TCA0 184 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 NELFBQ8WX92 580 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 SLC25A31Q9H0C2 315 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 DIABLOQ9NR28 239 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 RMND1Q9NWS8 449 aa2.55□□□□□ -2
SMARCE1-219ENST00000583294 C14orf166Q9Y224 244 aaKnown RBP2.55□□□□□ -2
SMARCE1-219ENST00000583294 NRCAMQ92823 1304 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 A0A1B0GXF2 115 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 CD300LBA8K4G0 201 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 hCG_2039718K7EN88 272 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 SYNGR2O43760 224 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 SPOPO43791 374 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 ZNF708P17019 499 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 S100A2P29034 98 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 DNASE1L1P49184 302 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 ZNF83P51522 516 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 RAB25P57735 213 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 GLYATQ6IB77 296 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 LY6G5BQ8NDX9 201 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 PLEKHA1Q9HB21 404 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 CLEC2DQ9UHP7 191 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
SMARCE1-219ENST00000583294 GGTLC3B5MD39 225 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 ZMPSTE24O75844 475 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 MYO1DO94832 1006 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 CECR9P0C854 216 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 GTF2F2P13984 249 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 LGALS7P47929 136 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 RAB38P57729 211 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms