RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 AGAP6Q5VW22 663 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 CCBE1Q6UXH8 406 aaPredicted RBP8.68□□□□□ -1.02
SS18-221ENST00000582448 Q6ZSN1 163 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 MOB3CQ70IA8 216 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 GDPD3Q7L5L3 318 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 NRARPQ7Z6K4 114 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 C1orf174Q8IYL3 243 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 ZNF525Q8N782 197 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 CHST4Q8NCG5 386 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 OR56B1Q8NGI3 324 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 DEDD2Q8WXF8 326 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 MUCL1Q96DR8 90 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 PAPOLGQ9BWT3 736 aaKnown RBP8.68□□□□□ -1.02
SS18-221ENST00000582448 TMEM59Q9BXS4 323 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 C11orf54Q9H0W9 315 aaPredicted RBP8.68□□□□□ -1.02
SS18-221ENST00000582448 METTL9Q9H1A3 318 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 SCPEP1Q9HB40 452 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 NOX3Q9HBY0 568 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 RBFOX1Q9NWB1 397 aaKnown RBP8.68□□□□□ -1.02
SS18-221ENST00000582448 TBC1D24Q9ULP9 559 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 NOP16Q9Y3C1 178 aaKnown RBP8.68□□□□□ -1.02
SS18-221ENST00000582448 CACNG2Q9Y698 323 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 IGKV1-9A0A0C4DH69 117 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 OR5H1A6NKK0 313 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 SHISA9B4DS77 424 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 SULT1C2O00338 296 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 ABCD4O14678 606 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 LDLRAD4O15165 306 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 IGHV4-31P0DP07 118 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 ZNF14P17017 642 aaPredicted RBP8.67□□□□□ -1.02
SS18-221ENST00000582448 ACKR3P25106 362 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 OR3A4PP47883 348 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 EFNB2P52799 333 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 DSCR9P59020 149 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 DGCR2P98153 550 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 LOXL1Q08397 574 aaPredicted RBP8.67□□□□□ -1.02
SS18-221ENST00000582448 DYRK1AQ13627 763 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 PPA1Q15181 289 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 RSU1Q15404 277 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 RSBN1Q5VWQ0 802 aaPredicted RBP8.67□□□□□ -1.02
SS18-221ENST00000582448 TMEM42Q69YG0 159 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 SSX8Q7RTT4 187 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 DTX2Q86UW9 622 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 LYPD6Q86Y78 171 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 ZNF584Q8IVC4 421 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 ZDHHC23Q8IYP9 409 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 YIPF5Q969M3 257 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 PPP1R14BQ96C90 147 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 SPACA5Q96QH8 159 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 GAL3ST1Q99999 423 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 NUDT16L1Q9BRJ7 211 aaKnown RBP8.67□□□□□ -1.02
SS18-221ENST00000582448 MXRA5Q9NR99 2828 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 COPZ2Q9P299 210 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 MYEF2Q9P2K5 600 aaKnown RBP8.67□□□□□ -1.02
SS18-221ENST00000582448 STARD10Q9Y365 291 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 SPEF1Q9Y4P9 236 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 MPC1Q9Y5U8 109 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 NBEAL1Q6ZS30 2694 aa8.67□□□□□ -1.02
SS18-221ENST00000582448 A0A096LNT2 108 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 A0A1W2PR80 420 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 ZNF850A8MQ14 1090 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 E7EQL1 145 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 ORC5O43913 435 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 CST4P01036 141 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 LPLP06858 475 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 ANOS1P23352 680 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 ALDH3B1P43353 468 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 FABP6P51161 128 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 BCAP31P51572 246 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 PPP1CBP62140 327 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 SNTB2Q13425 540 aaKnown RBP8.66□□□□□ -1.02
SS18-221ENST00000582448 SLC22A6Q4U2R8 563 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 TIMM23BQ5SRD1 257 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 SLC22A25Q6T423 547 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 FBXL14Q8N1E6 418 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 OR56B2PQ8NGI1 322 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 OR51T1Q8NGJ9 327 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 OR5D18Q8NGL1 313 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 OR10R2Q8NGX6 335 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 OR52I2Q8NH67 350 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 TRIM63Q969Q1 353 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 NKX3-1Q99801 234 aaPredicted RBP8.66□□□□□ -1.02
SS18-221ENST00000582448 BCL2L14Q9BZR8 327 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 DPAGT1Q9H3H5 408 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 TMPRSS5Q9H3S3 457 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 AUNIPQ9H7T9 357 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 TMEM160Q9NX00 188 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 KCNS2Q9ULS6 477 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 RHBDD3Q9Y3P4 386 aa8.66□□□□□ -1.02
SS18-221ENST00000582448 FUOMA2VDF0 154 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 CD300LBA8K4G0 201 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 TMEM14DPA8MWL7 114 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 H3BUI4 141 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 PLA2G10O15496 165 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 LY6HO94772 140 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 NGFP01138 241 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 IGKV3-15P01624 115 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 GTF2F2P13984 249 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 SLC25A16P16260 332 aa8.65□□□□□ -1.02
SS18-221ENST00000582448 USF1P22415 310 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms