RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 SULT1A1P50225 295 aa11.85□□□□□ -0.51
RNF43-205ENST00000581868 SUCLG1P53597 346 aaKnown RBP11.85□□□□□ -0.51
RNF43-205ENST00000581868 UCP2P55851 309 aa11.85□□□□□ -0.51
RNF43-205ENST00000581868 PSG4Q00888 419 aa11.85□□□□□ -0.51
RNF43-205ENST00000581868 EWSR1Q01844 656 aaKnown RBP eCLIP11.85□□□□□ -0.51
RNF43-205ENST00000581868 SPIN3Q5JUX0 258 aa11.85□□□□□ -0.51
RNF43-205ENST00000581868 SPEM1Q8N4L4 309 aa11.85□□□□□ -0.51
RNF43-205ENST00000581868 ABHD14AQ9BUJ0 271 aa11.85□□□□□ -0.51
RNF43-205ENST00000581868 PBDC1Q9BVG4 233 aa11.85□□□□□ -0.51
RNF43-205ENST00000581868 DUSP23Q9BVJ7 150 aa11.85□□□□□ -0.51
RNF43-205ENST00000581868 MAGT1Q9H0U3 335 aa11.85□□□□□ -0.51
RNF43-205ENST00000581868 TMEM38BQ9NVV0 291 aa11.85□□□□□ -0.51
RNF43-205ENST00000581868 STRAPQ9Y3F4 350 aaKnown RBP11.85□□□□□ -0.51
RNF43-205ENST00000581868 CCDC163A0A0D9SF12 145 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 C3orf85A0A1B0GTC6 90 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 UBE2CO00762 179 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 TERTO14746 1132 aaKnown RBP11.84□□□□□ -0.51
RNF43-205ENST00000581868 PDCD6O75340 191 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 CST2P09228 141 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 COX6A1P12074 109 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 CEBPGP53567 150 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 POLR2GP62487 172 aaKnown RBP eCLIP11.84□□□□□ -0.51
RNF43-205ENST00000581868 ASCL4Q6XD76 172 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 CALHM1Q8IU99 346 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 CCDC71LQ8N9Z2 235 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 IMMP1LQ96LU5 166 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 CACNA1EQ15878 2313 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 CDRT15L2A8MXV6 281 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 PPYP01298 95 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 NQO2P16083 231 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 NPBWR2P48146 333 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 RAB5CP51148 216 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 CARD18P57730 90 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 CCL20P78556 96 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 AAED1Q7RTV5 226 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 RPS19BP1Q86WX3 136 aaKnown RBP11.84□□□□□ -0.51
RNF43-205ENST00000581868 ZNF565Q8N9K5 539 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 ZFP62Q8NB50 900 aaPredicted RBP11.84□□□□□ -0.51
RNF43-205ENST00000581868 OR2G3Q8NGZ4 309 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 OR14L1PQ8NHC6 308 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 NIT2Q9NQR4 276 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 UBE2J1Q9Y385 318 aaPredicted RBP11.84□□□□□ -0.51
RNF43-205ENST00000581868 TMED3Q9Y3Q3 217 aa11.84□□□□□ -0.51
RNF43-205ENST00000581868 A0A0G2JMM0 328 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 A0A1W2PPB8 328 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 A0A1W2PRS3 328 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 KIR3DP1A8MWS1 328 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 MPPED1O15442 326 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 CBR3O75828 277 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 NXPH3O95157 252 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 KLK3P07288 261 aaPredicted RBP11.83□□□□□ -0.52
RNF43-205ENST00000581868 HOXB1P14653 301 aaPredicted RBP11.83□□□□□ -0.52
RNF43-205ENST00000581868 RGS19P49795 217 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 FUT6P51993 359 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 CEACAM16Q2WEN9 425 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 SLC25A26Q70HW3 274 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 OR2C3Q8N628 320 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 OR4D5Q8NGN0 318 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 BOD1Q96IK1 185 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 HS3ST3B1Q9Y662 390 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 FREM2Q5SZK8 3169 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 LOC102723996A0A087X1L8 192 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 OR6C6A6NF89 314 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 LINC00587B1AMM8 73 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 TXNL1O43396 289 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 CXCL13O43927 109 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 SSSCA1O60232 199 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 IGHV3-9P01782 118 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 S100A8P05109 93 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 FUT3P21217 361 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 RBM11P57052 281 aaKnown RBP11.83□□□□□ -0.52
RNF43-205ENST00000581868 RAC3P60763 192 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 OR1J1Q8NGS3 322 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 WNT5BQ9H1J7 359 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 TUBA4BQ9H853 241 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 WNT16Q9UBV4 365 aa11.83□□□□□ -0.52
RNF43-205ENST00000581868 ZMAT5Q9UDW3 170 aaKnown RBP11.83□□□□□ -0.52
RNF43-205ENST00000581868 IGSF23A1L1A6 192 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 ZNF587BE7ETH6 402 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 ATP6V0CP27449 155 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 NKX2-1P43699 371 aaPredicted RBP11.82□□□□□ -0.52
RNF43-205ENST00000581868 EXT1Q16394 746 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 SOHLH1Q5JUK2 328 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 TMEM42Q69YG0 159 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 ZNF695Q8IW36 515 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 ZNF611Q8N823 705 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 SUMF2Q8NBJ7 301 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 TAAR9Q96RI9 348 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 FOXB1Q99853 325 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 WDR54Q9H977 334 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 SLC7A10Q9NS82 523 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 hCG_38984A0A1B0GV85 526 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 K7N7A8 449 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 FABP1P07148 127 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 SMIM6P0DI80 62 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 CCL4P13236 92 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 CXCL12P48061 93 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 UCP3P55916 312 aa11.82□□□□□ -0.52
RNF43-205ENST00000581868 CXorf66Q5JRM2 361 aaPredicted RBP11.82□□□□□ -0.52
RNF43-205ENST00000581868 TBC1D26Q86UD7 250 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms