RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 PSMD8P48556 350 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 ENDOGQ14249 297 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 ZNF404Q494X3 552 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 CLEC18BQ6UXF7 455 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 TMPPEQ6ZT21 453 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 RBM45Q8IUH3 476 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 CPNE9Q8IYJ1 553 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 CYP4Z2PQ8N1L4 340 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 OR2K2Q8NGT1 345 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 OR2Y1Q8NGV0 311 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 OR5P2Q8WZ92 322 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 C19orf60Q96EN9 201 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 MSANTD3Q96H12 275 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 SMIM8Q96KF7 97 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 GLT1D1Q96MS3 346 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 ZNF396Q96N95 335 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 BEX2Q9BXY8 128 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 SDHAF2Q9NX18 166 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 VAPAQ9P0L0 249 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 SAMHD1Q9Y3Z3 626 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 ITGB4P16144 1822 aa1.82□□□□□ -2.12
SMCHD1-204ENST00000581226 GMNCA6NCL1 334 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 OR2AT4A6NND4 320 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 GGTLC3B5MD39 225 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 SHOX2O60902 331 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 OR2A4O95047 310 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 CST4P01036 141 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 IGHV3-53P01767 116 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 CCDC172P0C7W6 258 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 ZNF708P17019 499 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 CCNOP22674 350 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 PSG3Q16557 428 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 Q499Y3 187 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 FBXO48Q5FWF7 155 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 TPGS1Q6ZTW0 290 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 COMTD1Q86VU5 262 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 ST13P4Q8IZP2 240 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 CCNYL1Q8N7R7 359 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 OR6K2Q8NGY2 324 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 OR2AE1Q8NHA4 323 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 CCL17Q92583 94 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 RILPQ96NA2 401 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 OR2A7Q96R45 310 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 SRRQ9GZT4 340 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 POMKQ9H5K3 350 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 MAT2BQ9NZL9 334 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 TAC3Q9UHF0 121 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 MRM2Q9UI43 246 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 RAB23Q9ULC3 237 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 ZNF780BQ9Y6R6 833 aa1.81□□□□□ -2.12
SMCHD1-204ENST00000581226 LOC100506127A0A0U1RQW1 187 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 A0A1B0GW15 77 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 E7EWF7 191 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 hCG_2039718K7EN88 272 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 CDIPTO14735 213 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 TRGV3P03979 118 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 RLN2P04090 185 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 IGKV5-2P06315 115 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 PTHLHP12272 177 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 TAC1P20366 129 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 FUSP35637 526 aaKnown RBP eCLIP1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 DEKP35659 375 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 TPBGQ13641 420 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 Q3ZCU0 254 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 COPS6Q7L5N1 327 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 AMN1Q8IY45 258 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 SPICQ8N5J4 248 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 OR8A1Q8NGG7 326 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 OR8S1Q8NH09 359 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 QKIQ96PU8 341 aaKnown RBP eCLIP1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 INSIG2Q9Y5U4 225 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 ZNF706Q9Y5V0 76 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 ZNF407Q9C0G0 2248 aa1.8□□□□□ -2.12
SMCHD1-204ENST00000581226 LOC389332A0A1B0GUA5 103 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 ISLRO14498 428 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 PSCAO43653 123 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 ENSAO43768 121 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 ARR3P36575 388 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 KCNJ3P48549 501 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 SLC18A1P54219 525 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 ZBTB6Q15916 424 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 RESP18Q5W5W9 173 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 TCF24Q7RTU0 167 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 MARCH3Q86UD3 253 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 RPRMLQ8N4K4 120 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 CLHC1Q8NHS4 586 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 UBA3Q8TBC4 463 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 LRRC20Q8TCA0 184 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 OR5P3Q8WZ94 311 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 FMC1Q96HJ9 113 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 NXF2Q9GZY0 626 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 STK38LQ9Y2H1 464 aa1.79□□□□□ -2.12
SMCHD1-204ENST00000581226 NOS1P29475 1434 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 A0A0B4J2C4 111 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 MYBPHLA2RUH7 354 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 RBFOX3A6NFN3 312 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 ZNF729A6NN14 1252 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 K7EPK0 472 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 K7ERS5 55 aa1.78□□□□□ -2.12
SMCHD1-204ENST00000581226 GYG2O15488 501 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms