RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 LIAT1Q6ZQX7 453 aa16.9■□□□□ 0.3
SNX11-207ENST00000580875 ANKRD13BQ86YJ7 626 aa16.9■□□□□ 0.3
SNX11-207ENST00000580875 ZNF679Q8IYX0 411 aa16.9■□□□□ 0.3
SNX11-207ENST00000580875 ZNF561Q8N587 486 aa16.9■□□□□ 0.3
SNX11-207ENST00000580875 OR51E1Q8TCB6 317 aa16.9■□□□□ 0.3
SNX11-207ENST00000580875 RAB2BQ8WUD1 216 aa16.9■□□□□ 0.3
SNX11-207ENST00000580875 PBOV1Q9GZY1 135 aa16.9■□□□□ 0.3
SNX11-207ENST00000580875 GPR84Q9NQS5 396 aa16.9■□□□□ 0.3
SNX11-207ENST00000580875 NDUFB11Q9NX14 153 aa16.9■□□□□ 0.3
SNX11-207ENST00000580875 RSL24D1Q9UHA3 163 aaKnown RBP16.9■□□□□ 0.3
SNX11-207ENST00000580875 PIGLQ9Y2B2 252 aa16.9■□□□□ 0.3
SNX11-207ENST00000580875 PNMA8CA0A1B0GUJ8 204 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 hCG_1809904A0A1W2PP81 198 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 A0A1W2PPE2 198 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 A0A1W2PR64 198 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 A0A1W2PRV1 198 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 ZNF254O75437 659 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 FAHP16930 419 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 PAX6P26367 422 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 TMBIM6P55061 237 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 LGALS4P56470 323 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 CCDC58Q4VC31 144 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 FBLN7Q53RD9 439 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 TMEM200BQ69YZ2 307 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 C11orf42Q8N5U0 333 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 CD177Q8N6Q3 437 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 ZFP41Q8N8Y5 198 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 POC1AQ8NBT0 407 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 ISOC1Q96CN7 298 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 DGCR14Q96DF8 476 aaKnown RBP16.89■□□□□ 0.29
SNX11-207ENST00000580875 BCL7BQ9BQE9 202 aa16.89■□□□□ 0.29
SNX11-207ENST00000580875 ZNF701M0R085 212 aaPredicted RBP16.88■□□□□ 0.29
SNX11-207ENST00000580875 CHST1O43916 411 aa16.88■□□□□ 0.29
SNX11-207ENST00000580875 GABARAPO95166 117 aa16.88■□□□□ 0.29
SNX11-207ENST00000580875 IGLV3-1P01715 115 aa16.88■□□□□ 0.29
SNX11-207ENST00000580875 VSIG10L2P0DP72 767 aa16.88■□□□□ 0.29
SNX11-207ENST00000580875 CELP19835 753 aa16.88■□□□□ 0.29
SNX11-207ENST00000580875 PRDX2P32119 198 aa16.88■□□□□ 0.29
SNX11-207ENST00000580875 GPR50Q13585 617 aa16.88■□□□□ 0.29
SNX11-207ENST00000580875 ZNF829Q3KNS6 432 aaPredicted RBP16.88■□□□□ 0.29
SNX11-207ENST00000580875 SAMD5Q5TGI4 173 aa16.88■□□□□ 0.29
SNX11-207ENST00000580875 HIST2H2BDQ6DRA6 164 aa16.88■□□□□ 0.29
SNX11-207ENST00000580875 NAA50Q9GZZ1 169 aaKnown RBP16.88■□□□□ 0.29
SNX11-207ENST00000580875 E9PI62 339 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 SYNGR1O43759 233 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 RPP14O95059 124 aaKnown RBP16.87■□□□□ 0.29
SNX11-207ENST00000580875 NRASP01111 189 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 PGA5P0DJD9 388 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 COX7A1P24310 79 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 GADD45AP24522 165 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 HAAOP46952 286 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 BMXP51813 675 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 GTF2A1P52655 376 aaPredicted RBP16.87■□□□□ 0.29
SNX11-207ENST00000580875 ERVFRD-1P60508 538 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 CDK5R1Q15078 307 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 RPL22L1Q6P5R6 122 aaKnown RBP16.87■□□□□ 0.29
SNX11-207ENST00000580875 SLC16A12Q6ZSM3 486 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 ZNF573Q86YE8 665 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 OR4M1Q8NGD0 313 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 PIFOQ8TCI5 191 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 ZNF488Q96MN9 340 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 NUFIP1Q9UHK0 495 aaKnown RBP16.87■□□□□ 0.29
SNX11-207ENST00000580875 POLDIP2Q9Y2S7 368 aa16.87■□□□□ 0.29
SNX11-207ENST00000580875 VGLL3A8MV65 326 aa16.86■□□□□ 0.29
SNX11-207ENST00000580875 J3QT63 122 aa16.86■□□□□ 0.29
SNX11-207ENST00000580875 OGG1O15527 345 aa16.86■□□□□ 0.29
SNX11-207ENST00000580875 AIREO43918 545 aa16.86■□□□□ 0.29
SNX11-207ENST00000580875 NOS1APO75052 506 aaPredicted RBP16.86■□□□□ 0.29
SNX11-207ENST00000580875 DHRS3O75911 302 aa16.86■□□□□ 0.29
SNX11-207ENST00000580875 CCL3L1P16619 93 aa16.86■□□□□ 0.29
SNX11-207ENST00000580875 PSMA1P25786 263 aaKnown RBP16.86■□□□□ 0.29
SNX11-207ENST00000580875 DMKNQ6E0U4 476 aaPredicted RBP16.86■□□□□ 0.29
SNX11-207ENST00000580875 SMIM19Q96E16 107 aa16.86■□□□□ 0.29
SNX11-207ENST00000580875 NRIP2Q9BQI9 281 aa16.86■□□□□ 0.29
SNX11-207ENST00000580875 STUB1Q9UNE7 303 aa16.86■□□□□ 0.29
SNX11-207ENST00000580875 MEGF11A6BM72 1044 aa16.85■□□□□ 0.29
SNX11-207ENST00000580875 NXPH2O95156 264 aa16.85■□□□□ 0.29
SNX11-207ENST00000580875 CEBPDP49716 269 aaPredicted RBP16.85■□□□□ 0.29
SNX11-207ENST00000580875 RPS25P62851 125 aaKnown RBP16.85■□□□□ 0.29
SNX11-207ENST00000580875 MFGE8Q08431 387 aaPredicted RBP16.85■□□□□ 0.29
SNX11-207ENST00000580875 TRAM1Q15629 374 aa16.85■□□□□ 0.29
SNX11-207ENST00000580875 FAM189A2Q15884 450 aa16.85■□□□□ 0.29
SNX11-207ENST00000580875 REC114Q7Z4M0 266 aa16.85■□□□□ 0.29
SNX11-207ENST00000580875 CALHM1Q8IU99 346 aa16.85■□□□□ 0.29
SNX11-207ENST00000580875 PPP1R14AQ96A00 147 aa16.85■□□□□ 0.29
SNX11-207ENST00000580875 NKX3-1Q99801 234 aaPredicted RBP16.85■□□□□ 0.29
SNX11-207ENST00000580875 SIRT4Q9Y6E7 314 aaPredicted RBP16.85■□□□□ 0.29
SNX11-207ENST00000580875 TRBV2A0A0J9YWF9 115 aa16.84■□□□□ 0.29
SNX11-207ENST00000580875 FAM90A8PA6NJQ4 464 aa16.84■□□□□ 0.29
SNX11-207ENST00000580875 H3BMQ9 156 aa16.84■□□□□ 0.29
SNX11-207ENST00000580875 TTRP02766 147 aa16.84■□□□□ 0.29
SNX11-207ENST00000580875 TK1P04183 234 aa16.84■□□□□ 0.29
SNX11-207ENST00000580875 CD1AP06126 327 aa16.84■□□□□ 0.29
SNX11-207ENST00000580875 ALKBH1Q13686 389 aaKnown RBP16.84■□□□□ 0.29
SNX11-207ENST00000580875 ZNF273Q14593 569 aa16.84■□□□□ 0.29
SNX11-207ENST00000580875 CLVS2Q5SYC1 327 aa16.84■□□□□ 0.29
SNX11-207ENST00000580875 ZNF782Q6ZMW2 699 aaPredicted RBP16.84■□□□□ 0.29
SNX11-207ENST00000580875 LHFPL4Q7Z7J7 247 aa16.84■□□□□ 0.29
SNX11-207ENST00000580875 RPS4Y2Q8TD47 263 aa16.84■□□□□ 0.29
SNX11-207ENST00000580875 CHCHD6Q9BRQ6 235 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms