RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ATG5Q9H1Y0 275 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 PATZ1Q9HBE1 687 aaKnown RBP11.94□□□□□ -0.5
SKA2-205ENST00000580541 DIABLOQ9NR28 239 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 DOCK11Q5JSL3 2073 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 A0A075B6Q4 140 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 IGKV1D-17A0A075B6S4 117 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 A0A0A6YYH2 397 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 A6NJ64 397 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 CEACAM18A8MTB9 384 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 MCRIP1C9JLW8 97 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 TNFRSF13BO14836 293 aaPredicted RBP11.93□□□□□ -0.5
SKA2-205ENST00000580541 GEMIN2O14893 280 aaKnown RBP11.93□□□□□ -0.5
SKA2-205ENST00000580541 LDLRAD4O15165 306 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 SIGLEC5O15389 551 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 WNT2P09544 360 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 SNRPBP14678 240 aaKnown RBP11.93□□□□□ -0.5
SKA2-205ENST00000580541 GABRR1P24046 479 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 DUSP1P28562 367 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 SNU13P55769 128 aaKnown RBP11.93□□□□□ -0.5
SKA2-205ENST00000580541 LOXL1Q08397 574 aaPredicted RBP11.93□□□□□ -0.5
SKA2-205ENST00000580541 TAF9Q16594 264 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 PIGYQ3MUY2 71 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 ESCO2Q56NI9 601 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 UBE2NLQ5JXB2 153 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 ATAD3CQ5T2N8 411 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 CD276Q5ZPR3 534 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 FAM89BQ8N5H3 189 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 LGALS14Q8TCE9 139 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 SEH1LQ96EE3 360 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 CCL13Q99616 98 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 REG4Q9BYZ8 158 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 MMP27Q9H306 513 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 COMMD3Q9UBI1 195 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 A3GALT2U3KPV4 340 aa11.93□□□□□ -0.5
SKA2-205ENST00000580541 PRRC2AP48634 2157 aaKnown RBP11.93□□□□□ -0.5
SKA2-205ENST00000580541 A0A1W2PP11 408 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 ECDO95905 644 aaPredicted RBP11.92□□□□□ -0.5
SKA2-205ENST00000580541 OR2H2O95918 312 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 PAHP00439 452 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 BLVRBP30043 206 aaPredicted RBP11.92□□□□□ -0.5
SKA2-205ENST00000580541 GNB2P62879 340 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 COL10A1Q03692 680 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 UNC119Q13432 240 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 OR10K2Q6IF99 312 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 CD177Q8N6Q3 437 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 SAMD12Q8N8I0 201 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 ASCC1Q8N9N2 400 aaKnown RBP11.92□□□□□ -0.5
SKA2-205ENST00000580541 MCFD2Q8NI22 146 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 DCUN1D5Q9BTE7 237 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 LPAR5Q9H1C0 372 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 ABCG5Q9H222 651 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 PLEKHJ1Q9NW61 149 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 RHBDL2Q9NX52 303 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 CLN8Q9UBY8 286 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 ZNF222Q9UK12 451 aa11.92□□□□□ -0.5
SKA2-205ENST00000580541 CCDC168Q8NDH2 2452 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 A0A0B4J203 849 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 H7C1Q1 480 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 K7N7A8 449 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 MGST3O14880 152 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 RGS5O15539 181 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 PDCD6O75340 191 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 CA11O75493 328 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 FOXH1O75593 365 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 APOA1P02647 267 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 S100A5P33763 92 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 TALDO1P37837 337 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 VEGFCP49767 419 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 PAN3Q58A45 887 aaKnown RBP11.91□□□□□ -0.5
SKA2-205ENST00000580541 Q6P435 159 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 Q6ZTK2 550 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 GDPD3Q7L5L3 318 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 TMEM185AQ8NFB2 350 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 CLDND2Q8NHS1 167 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 NUDT16L1Q9BRJ7 211 aaKnown RBP11.91□□□□□ -0.5
SKA2-205ENST00000580541 NARFLQ9H6Q4 476 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 RABL2AQ9UBK7 228 aaPredicted RBP11.91□□□□□ -0.5
SKA2-205ENST00000580541 SLC25A10Q9UBX3 287 aaPredicted RBP11.91□□□□□ -0.5
SKA2-205ENST00000580541 HSF4Q9ULV5 492 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 RABL2BQ9UNT1 228 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 PEX16Q9Y5Y5 336 aa11.91□□□□□ -0.5
SKA2-205ENST00000580541 A0A1W2PPH5 198 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 FAM25AB3EWG3 89 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 FAM25CB3EWG5 89 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 FAM25GB3EWG6 89 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 SIRPB1O00241 398 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 SLC33A1O00400 549 aaPredicted RBP11.9□□□□□ -0.5
SKA2-205ENST00000580541 DVL1O14640 695 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 IGHV2-5P01817 119 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 TK1P04183 234 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 NDUFB7P17568 137 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 MRPS15P82914 257 aaKnown RBP11.9□□□□□ -0.5
SKA2-205ENST00000580541 GRK1Q15835 563 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 LYPD2Q6UXB3 125 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 OR8H2Q8N162 312 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 SUMF2Q8NBJ7 301 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 ZNRF1Q8ND25 227 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 OR10R2Q8NGX6 335 aa11.9□□□□□ -0.5
SKA2-205ENST00000580541 NEK7Q8TDX7 302 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms