RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 C19orf67A6NJJ6 358 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 MED6O75586 246 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 LY86O95711 162 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 MUC1P15941 1255 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-209ENST00000580095 CHATP28329 748 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 CYB561P49447 251 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 ZNF133P52736 654 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-209ENST00000580095 DCAF12Q5T6F0 453 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 MEX3BQ6ZN04 569 aaKnown RBP9.07□□□□□ -0.96
TOP3A-209ENST00000580095 LINC00696Q6ZRV3 163 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 LDLRAD3Q86YD5 345 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 STOML3Q8TAV4 291 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 RNF141Q8WVD5 230 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 SIGLEC12Q96PQ1 595 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 TAF9BQ9HBM6 251 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 GPR35Q9HC97 309 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 LRFN1Q9P244 771 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 IGHV3-64DA0A0J9YX35 117 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 ZNF503-AS2A6NEH8 195 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 OR6C6A6NF89 314 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 GJE1A6NN92 205 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 FGF16O43320 207 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 ZNF728P0DKX0 622 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 TDGF1P13385 188 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 NFYBP25208 207 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 RPL12P30050 165 aaKnown RBP9.07□□□□□ -0.96
TOP3A-209ENST00000580095 IL15RAQ13261 267 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 ABCA11PQ4W5N1 156 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 OR2B11Q5JQS5 317 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 RAB11FIP2Q7L804 512 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 WDR5BQ86VZ2 330 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 RTN4IP1Q8WWV3 396 aaPredicted RBP9.07□□□□□ -0.96
TOP3A-209ENST00000580095 NEU1Q99519 415 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 ZNF442Q9H7R0 627 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.07□□□□□ -0.96
TOP3A-209ENST00000580095 SLC7A10Q9NS82 523 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 C1orf123Q9NWV4 160 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 FBXL17Q9UF56 701 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 TIMM10BQ9Y5J6 103 aa9.07□□□□□ -0.96
TOP3A-209ENST00000580095 K7EPK0 472 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 NXPH3O95157 252 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 CER1O95813 267 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 CST2P09228 141 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 AKR1C3P42330 323 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 FHITP49789 147 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 TMEM33P57088 247 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 FAM189A2Q15884 450 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 H3F3CQ6NXT2 135 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 OSR2Q8N2R0 312 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 FAM71E2Q8N5Q1 922 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 SUMF1Q8NBK3 374 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 C2CD4CQ8TF44 421 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 PSMF1Q92530 271 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 SPSB1Q96BD6 273 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 AQP10Q96PS8 301 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 LPAR3Q9UBY5 353 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 RFNGQ9Y644 331 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 PCSK5Q92824 1860 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 C9JQL5 133 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 SLC31A2O15432 143 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 C1QL1O75973 258 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 CD79AP11912 226 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 NPBWR1P48145 328 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 DUSP3P51452 185 aaPredicted RBP9.06□□□□□ -0.96
TOP3A-209ENST00000580095 TAS2R60P59551 318 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 ARF1P84077 181 aaKnown RBP9.06□□□□□ -0.96
TOP3A-209ENST00000580095 PDZK1IP1Q13113 114 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 PPA1Q15181 289 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 ETV3LQ6ZN32 361 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 TUSC5Q8IXB3 177 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 UBALD2Q8IYN6 164 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 ZNF611Q8N823 705 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 OR52M1Q8NGK5 317 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 CPT1CQ8TCG5 803 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 ARL11Q969Q4 196 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 ADGRG7Q96K78 797 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 CNTNAP3BQ96NU0 1288 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 CNTNAP3Q9BZ76 1288 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 FOXJ2Q9P0K8 574 aa9.06□□□□□ -0.96
TOP3A-209ENST00000580095 hCG_38984A0A1B0GV85 526 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 C5orf49A4QMS7 147 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 CRYM-AS1A6NIL9 109 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 NGFP01138 241 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 MBPP02686 304 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-209ENST00000580095 GPM6AP51674 278 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 FOXO1Q12778 655 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 DAZAP2Q15038 168 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-209ENST00000580095 CNN3Q15417 329 aaKnown RBP9.05□□□□□ -0.96
TOP3A-209ENST00000580095 NSUN5P2Q63ZY6 315 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 C6orf15Q6UXA7 325 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-209ENST00000580095 C1orf210Q8IVY1 113 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 OR56B2PQ8NGI1 322 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 SLAMF9Q96A28 289 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 SF3B5Q9BWJ5 86 aaKnown RBP9.05□□□□□ -0.96
TOP3A-209ENST00000580095 PRRG4Q9BZD6 226 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 TMEM100Q9NV29 134 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 NECAP2Q9NVZ3 263 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 DMXL1Q9Y485 3027 aa9.05□□□□□ -0.96
TOP3A-209ENST00000580095 MRPL33O75394 65 aaKnown RBP9.05□□□□□ -0.96
TOP3A-209ENST00000580095 JMJD7P0C870 316 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms