RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 CAPSLQ8WWF8 208 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 CFHR4Q92496 578 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 STMN2Q93045 179 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 SPSB1Q96BD6 273 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 R3HDM4Q96D70 268 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 C4orf36Q96KX1 117 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MMP28Q9H239 520 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TMEM133Q9H2Q1 129 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 SERTAD4Q9NUC0 356 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 AASSQ9UDR5 926 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 HHLA2Q9UM44 414 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PCDHGB5Q9Y5G0 923 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MINOS1-NBL1R4GNA1 71 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PRKDCP78527 4128 aaKnown RBP7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TRGV10A0A0A0MS01 117 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 A0A1W2PRX2 142 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 SNTNA6NMZ2 147 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 H3BUI4 141 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MMP23AO75900 390 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ISG15P05161 165 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ALPLP05186 524 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 HCKP08631 526 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 CDK2P24941 298 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 CD24P25063 80 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 HTR1DP28221 377 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 BLCAPP62952 87 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 AESQ08117 197 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PDZK1IP1Q13113 114 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 IL18R1Q13478 541 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 RBM39Q14498 530 aaKnown RBP7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 KPNB1Q14974 876 aaKnown RBP7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ZNF146Q15072 292 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 BEAN1Q3B7T3 259 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MEDAGQ5VYS4 303 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 Q6ZS46 218 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ZBTB49Q6ZSB9 765 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 UTS2BQ765I0 119 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 RNF144BQ7Z419 303 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 KCTD20Q7Z5Y7 419 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ABHD12Q8N2K0 398 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ACBD7Q8N6N7 88 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TRUB1Q8WWH5 349 aaKnown RBP7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 RNF166Q96A37 237 aaPredicted RBP7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MRPL48Q96GC5 212 aaKnown RBP7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MBOAT4Q96T53 435 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 CITED2Q99967 270 aaPredicted RBP7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 GAL3ST2Q9H3Q3 398 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 HMG20AQ9NP66 347 aa7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 UBE2J1Q9Y385 318 aaPredicted RBP7.41□□□□□ -1.22
CDK5RAP3-211ENST00000578996 IGKV1-12A0A0C4DH73 117 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 FUOMA2VDF0 154 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 HSPB6O14558 160 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TOR1AO14656 332 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 KDM4BO94953 1096 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 IGKV1D-12P01611 117 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ALDOBP05062 364 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TMEM225BP0DP42 221 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PTGFRP43088 359 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 GLIPR1P48060 266 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ALDH3A2P51648 485 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 CCR9P51686 369 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ARHGDIBP52566 201 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 EMX1Q04741 257 aaPredicted RBP7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ALKBH1Q13686 389 aaKnown RBP7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ATXN7L3Q14CW9 347 aaPredicted RBP7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OXLD1Q5BKU9 147 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 KRBOX4Q5JUW0 171 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 SAMD5Q5TGI4 173 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 LPCAT4Q643R3 524 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR52W1Q6IF63 320 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 LHFPL3Q86UP9 236 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 NDUFA11Q86Y39 141 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 Q8N2B8 174 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR4F17Q8NGA8 305 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR4P4Q8NGL7 312 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ZNF596Q8TC21 504 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TSEN15Q8WW01 171 aaKnown RBP7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 LGALS12Q96DT0 336 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PELI1Q96FA3 418 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 HRASLS5Q96KN8 279 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR4F4Q96R69 305 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ALG8Q9BVK2 526 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 GMPPBQ9Y5P6 360 aa7.4□□□□□ -1.22
CDK5RAP3-211ENST00000578996 J3QRE1 110 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 DEGS1O15121 323 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 XPNPEP2O43895 674 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 PF4V1P10720 104 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 DBTP11182 482 aaKnown RBP7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 NFYBP25208 207 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 ERP29P30040 261 aaKnown RBP7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 BRS3P32247 399 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 GDNFP39905 211 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 OR3A4PP47883 348 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 DYNLT3P51808 116 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 SNRPGP62308 76 aaKnown RBP7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 FDX2Q6P4F2 183 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CENPVQ7Z7K6 275 aaPredicted RBP7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 RTN4RL2Q86UN3 420 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 SERPINA12Q8IW75 414 aa7.39□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CBR4Q8N4T8 237 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms