RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ACP7Q6ZNF0 438 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 DTX3Q8N9I9 347 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 PPP1R35Q8TAP8 253 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 DEDD2Q8WXF8 326 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 NICN1Q9BSH3 213 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 IFT22Q9H7X7 185 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 SEBOXQ9HB31 216 aaPredicted RBP11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 HES4Q9HCC6 221 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 BEX4Q9NWD9 120 aaPredicted RBP11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 SPG11Q96JI7 2443 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 IGHV3-64DA0A0J9YX35 117 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 H7C1Q1 480 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 CD3GP09693 182 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 ZNF44P15621 663 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 MADCAM1Q13477 382 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 MICBQ29980 383 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 HFEQ30201 348 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 DEFB113Q30KQ7 82 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 NKAPLQ5M9Q1 402 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 ZNF826PQ6ZT77 177 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 PEG10Q86TG7 708 aaKnown RBP11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 ZCCHC24Q8N2G6 241 aaKnown RBP11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 SETD6Q8TBK2 473 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 ARHGAP5-AS1Q96IT6 56 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 PECRQ9BY49 303 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 RIMS4Q9H426 269 aaPredicted RBP11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 IFT46Q9NQC8 304 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 DLL4Q9NR61 685 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 LRBAP50851 2863 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 APCP25054 2843 aa11.73□□□□□ -0.53
CSNK1D-209ENST00000578904 POLQO75417 2590 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 A0A0A6YYD4 124 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 TRAV38-1A0A0B4J264 116 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 IGHV1-69-2A0A0G2JMI3 117 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 CSF1P09603 554 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 IL7P13232 177 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 MUC1P15941 1255 aaPredicted RBP11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 GNB3P16520 340 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 CHATP28329 748 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 FAUP35544 74 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 MDH2P40926 338 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 KCNJ3P48549 501 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 SNU13P55769 128 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 MRPS11P82912 194 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 MOGAT2Q3SYC2 334 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 ZNF57Q68EA5 555 aaPredicted RBP11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 MZT2BQ6NZ67 158 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 TOMM5Q8N4H5 51 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 BOLLQ8N9W6 283 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 NEK7Q8TDX7 302 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 MBD6Q96DN6 1003 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 PERPQ96FX8 193 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 COX4I2Q96KJ9 171 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 ZNF488Q96MN9 340 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 ZNF701Q9NV72 531 aaPredicted RBP11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 NLKQ9UBE8 527 aa11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 ZNF107Q9UII5 783 aaPredicted RBP11.72□□□□□ -0.53
CSNK1D-209ENST00000578904 ANKRD17O75179 2603 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 TMEM235A6NFC5 223 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 POM121CA8CG34 1229 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 MFNGO00587 321 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 HAND1O96004 215 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 LHBP01229 141 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 CSF3P09919 207 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 ATP5J2P56134 94 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 TMEM50BP56557 158 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 GMFBP60983 142 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 BATF2Q8N1L9 274 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 OR52I2Q8NH67 350 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 GPX8Q8TED1 209 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 CMSS1Q9BQ75 279 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 C7orf50Q9BRJ6 194 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 GSX2Q9BZM3 304 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 CHST6Q9GZX3 395 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 BARX1Q9HBU1 254 aaPredicted RBP11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 TMEM106BQ9NUM4 274 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 MTFP1Q9UDX5 166 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 OR14J1Q9UGF5 321 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 WIPI2Q9Y4P8 454 aa11.71□□□□□ -0.53
CSNK1D-209ENST00000578904 USF3Q68DE3 2245 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 FOXI3A8MTJ6 420 aaPredicted RBP11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 F8VVB4 439 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 F8VWA3 439 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 NDUFA2O43678 99 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 NDUFS7O75251 213 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 RCVRNP35243 200 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 GDNFP39905 211 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 EFNA4P52798 201 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 DGCR2P98153 550 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 BAK1Q16611 211 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 RGS21Q2M5E4 152 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 PAN3Q58A45 887 aaKnown RBP11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 PLAC9Q5JTB6 97 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 DNM1P46Q6ZS02 220 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 C6orf201Q7Z4U5 140 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 TRAPPC6BQ86SZ2 158 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 BIVMQ86UB2 503 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 LYSMD2Q8IV50 215 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 GCSAMQ8N6F7 178 aa11.7□□□□□ -0.54
CSNK1D-209ENST00000578904 ST8SIA4Q92187 359 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms