RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 OR10K1Q8NGX5 313 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 SLC25A40Q8TBP6 338 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 GPX8Q8TED1 209 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 OR5P3Q8WZ94 311 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 AQP3Q92482 292 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 GCDHQ92947 438 aaPredicted RBP8.62□□□□□ -1.03
SS18-210ENST00000578700 MSI2Q96DH6 328 aaKnown RBP8.62□□□□□ -1.03
SS18-210ENST00000578700 SEH1LQ96EE3 360 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 C1orf147Q96MC9 270 aaPredicted RBP8.62□□□□□ -1.03
SS18-210ENST00000578700 TM2D1Q9BX74 207 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 OR2J1Q9GZK6 312 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 MMP28Q9H239 520 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 HRASLSQ9HDD0 168 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 TGP01266 2768 aa8.62□□□□□ -1.03
SS18-210ENST00000578700 DYSFO75923 2080 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 IGHV2OR16-5A0A0B4J2B6 119 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 IGHV1-18A0A0C4DH31 117 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 MEIOCA2RUB1 952 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 TMEM235A6NFC5 223 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 ZNF732B4DXR9 585 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 DISC1C4P0D8 188 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 INMT-MINDY4F8WBC2 141 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 TPD52L2O43399 206 aaKnown RBP8.61□□□□□ -1.03
SS18-210ENST00000578700 AKR7A2O43488 359 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 SPRY1O43609 319 aaPredicted RBP8.61□□□□□ -1.03
SS18-210ENST00000578700 ANGPTL7O43827 346 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 TIMM8AO60220 97 aaPredicted RBP8.61□□□□□ -1.03
SS18-210ENST00000578700 HNRNPCP07910 306 aaKnown RBP eCLIP8.61□□□□□ -1.03
SS18-210ENST00000578700 MELTFP08582 738 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 PTHLHP12272 177 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 ZNF35P13682 527 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 TBPP20226 339 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 CA6P23280 308 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 GABRR1P24046 479 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 PTAFRP25105 342 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 CD40P25942 277 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 GIFP27352 417 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 BLVRBP30043 206 aaPredicted RBP8.61□□□□□ -1.03
SS18-210ENST00000578700 SRP14P37108 136 aaKnown RBP8.61□□□□□ -1.03
SS18-210ENST00000578700 HAAOP46952 286 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 PDLIM4P50479 330 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 ZP1P60852 638 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 BTG1P62324 171 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 GUCA2AQ02747 115 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 MEF2DQ14814 521 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 OR8G1Q15617 311 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 ZNF260Q3ZCT1 412 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 ACTBL2Q562R1 376 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 OLFML2AQ68BL7 652 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 STEAP1BQ6NZ63 245 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 ZNF782Q6ZMW2 699 aaPredicted RBP8.61□□□□□ -1.03
SS18-210ENST00000578700 SLC25A26Q70HW3 274 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 AKAP14Q86UN6 197 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 FAM89BQ8N5H3 189 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 CELF2-AS1Q8N7Q2 184 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 SPERTQ8NA61 448 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 TMEM229BQ8NBD8 167 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 KLF14Q8TD94 323 aaPredicted RBP8.61□□□□□ -1.03
SS18-210ENST00000578700 MARVELD1Q9BSK0 173 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 ADAT1Q9BUB4 502 aaKnown RBP8.61□□□□□ -1.03
SS18-210ENST00000578700 PLK3Q9H4B4 646 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 ZMAT3Q9HA38 289 aaKnown RBP8.61□□□□□ -1.03
SS18-210ENST00000578700 RHOFQ9HBH0 211 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 PLEKHJ1Q9NW61 149 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 MGAM2Q2M2H8 2515 aa8.61□□□□□ -1.03
SS18-210ENST00000578700 IGKV1-27A0A075B6S5 117 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 MEIS3P1A6NDR6 274 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A10PA6NDY2 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A18PA6NE21 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A16PA6NEW6 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A20PA6NIJ5 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A8PA6NJQ4 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A7PA6NKC0 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A22PA8MWA6 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A12PA8MX19 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A5PA8MXJ8 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 VSTM5A8MXK1 200 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A23PA8MXZ1 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 IQCF6A8MYZ5 107 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 SOCS1O15524 211 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 TCF21O43680 179 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 CA11O75493 328 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 RAB3DO95716 219 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 TCRBP04435 133 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 IFNA6P05013 189 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 H2AFB2P0C5Z0 115 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A15PP0C7V4 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A13PP0C7W8 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A14PP0C7W9 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 FAM90A24PP0C7X0 464 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 GNB3P16520 340 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 RAG2P55895 527 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 NAAAQ02083 359 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 CR1LQ2VPA4 569 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 MOGAT2Q3SYC2 334 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 PLA1AQ53H76 456 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 RNASE10Q5GAN6 216 aaKnown RBP8.6□□□□□ -1.03
SS18-210ENST00000578700 NKAPLQ5M9Q1 402 aa8.6□□□□□ -1.03
SS18-210ENST00000578700 SFRP4Q6FHJ7 346 aaPredicted RBP8.6□□□□□ -1.03
SS18-210ENST00000578700 RGS7BPQ6MZT1 257 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms