RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 CLN6Q9NWW5 311 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 DPM3Q9P2X0 92 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 OR52A1Q9UKL2 312 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 CHTOPQ9Y3Y2 248 aaKnown RBP9□□□□□ -0.97
SMARCE1-214ENST00000578112 A0A1B0GTI1 187 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 TCRBV4S1A1TA0A5B7 111 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 LEUTXA8MZ59 168 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 K7EIL1 84 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 PSMD9O00233 223 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 GNGT2O14610 69 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 ACTA2P62736 377 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 ACTG2P63267 376 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 ACTC1P68032 377 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 ACTA1P68133 377 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 GID4Q8IVV7 300 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 ADGRG5Q8IZF4 528 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 PP6455Q8WZ26 134 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 NSL1Q96IY1 281 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 C9orf16Q9BUW7 83 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 GPR173Q9NS66 373 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 ZFP57Q9NU63 452 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 HHLA2Q9UM44 414 aa9□□□□□ -0.97
SMARCE1-214ENST00000578112 A0A087X0M5 115 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 A0A1B0GX30 115 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 CYB5AP00167 134 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 SERPINA3P01011 423 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 CALB2P22676 271 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 S100A12P80511 92 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 ZNF91Q05481 1191 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 ZNF146Q15072 292 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 NXNL2Q5VZ03 156 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 ZNF322Q6U7Q0 402 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 ZNF782Q6ZMW2 699 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 MEPCEQ7L2J0 689 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 CENPVQ7Z7K6 275 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 ZNF676Q8N7Q3 588 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 ASCC1Q8N9N2 400 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 OR4M1Q8NGD0 313 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 NDNFQ8TB73 568 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 CHST5Q9GZS9 411 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 OR14J1Q9UGF5 321 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 IKZF2Q9UKS7 526 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 MPIG6BO95866 241 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 IGLL1P15814 213 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 HSPA13P48723 471 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 CRISP1P54107 249 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 SLC34A1Q06495 639 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 SNAPC1Q16533 368 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 FAM122CQ6P4D5 195 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 SLC35F2Q8IXU6 374 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 OSR2Q8N2R0 312 aa8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 H2AFY2Q9P0M6 372 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-214ENST00000578112 TRBV2A0A0J9YWF9 115 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 B2RBV5 119 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 SULT1C4O75897 302 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 FAM107AO95990 144 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 HAND1O96004 215 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 MYCNOSP40205 109 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 EDDM3BP56851 147 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 MFGE8Q08431 387 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 HEPN1Q6WQI6 88 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 SLC16A12Q6ZSM3 486 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 UTS2BQ765I0 119 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 ASRGL1Q7L266 308 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 TCF23Q7RTU1 214 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 TMEM219Q86XT9 240 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 LINC00482Q8N8I6 264 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 OR4P4Q8NGL7 312 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 ZNF488Q96MN9 340 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 PLEKHA1Q9HB21 404 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 WARS2Q9UGM6 360 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 AMMECR1Q9Y4X0 333 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 DSCAML1Q8TD84 2053 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 CLN5O75503 358 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 PRB2P02812 416 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 CSN2P05814 226 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 LMO1P25800 156 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 MNDAP41218 407 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 ATP1B3P54709 279 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 PRRX1P54821 245 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 P2RX3P56373 397 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 HABP2Q14520 560 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 CATSPERDQ86XM0 798 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 SAXO1Q8IYX7 474 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 LYG1Q8N1E2 194 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 CHST4Q8NCG5 386 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 BBS1Q8NFJ9 593 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 MYDGFQ969H8 173 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 SLC25A33Q9BSK2 321 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 COPS3Q9UNS2 423 aa8.98□□□□□ -0.97
SMARCE1-214ENST00000578112 TRGV10A0A0A0MS01 117 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 TMEM82A0PJX8 343 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 DPPA5A6NC42 116 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 RAMP3O60896 148 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 ZFPL1O95159 310 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 KRT8P05787 483 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 UBCP0CG48 685 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 CEBPDP49716 269 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 BLCAPP62952 87 aa8.97□□□□□ -0.97
SMARCE1-214ENST00000578112 PPP1R8Q12972 351 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms