RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 RBFOX1Q9NWB1 397 aaKnown RBP13.12□□□□□ -0.31
VAPA-204ENST00000577901 TAS2R4Q9NYW5 299 aa13.12□□□□□ -0.31
VAPA-204ENST00000577901 A0A0U1RQK1 487 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 K7N7A8 449 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 CLPXO76031 633 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 KDM4BO94953 1096 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 ALDOBP05062 364 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 CD1AP06126 327 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 PRKACAP17612 351 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 CELP19835 753 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 VHLP40337 213 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 PROK1P58294 105 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 BDH1Q02338 343 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 COL10A1Q03692 680 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 TAF9Q16594 264 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 Q499Y3 187 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 SPIN3Q5JUX0 258 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 ZNF529Q6P280 563 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 C1orf122Q6ZSJ8 110 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 VMO1Q7Z5L0 202 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 LDLRAD3Q86YD5 345 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 FAM185AQ8N0U4 392 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 ASCC1Q8N9N2 400 aaKnown RBP13.11□□□□□ -0.31
VAPA-204ENST00000577901 OR5D13Q8NGL4 314 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 GPER1Q99527 375 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 HMG20AQ9NP66 347 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 TMEM138Q9NPI0 162 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 CKLFQ9UBR5 152 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 RAB26Q9ULW5 256 aa13.11□□□□□ -0.31
VAPA-204ENST00000577901 TRBV5-5A0A0J9YX44 114 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 PNMA8CA0A1B0GUJ8 204 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 M0R1W7 72 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 HAND1O96004 215 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 IER3P46695 156 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 BMXP51813 675 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 RPL31P62899 125 aaKnown RBP13.1□□□□□ -0.31
VAPA-204ENST00000577901 SLC35A2P78381 396 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 ACSM1Q08AH1 577 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 ZNF146Q15072 292 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 GDPD3Q7L5L3 318 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 OR13C5Q8NGS8 318 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 THRSPQ92748 146 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 SNX22Q96L94 193 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 PGLYRP3Q96LB9 341 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 CNBD2Q96M20 576 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 DUSP21Q9H596 190 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 METTL8Q9H825 291 aaKnown RBP13.1□□□□□ -0.31
VAPA-204ENST00000577901 TCF7L1Q9HCS4 588 aa13.1□□□□□ -0.31
VAPA-204ENST00000577901 IGKV1-12A0A0C4DH73 117 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 hCG_1809904A0A1W2PP81 198 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 A0A1W2PPE2 198 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 A0A1W2PR64 198 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 A0A1W2PRV1 198 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 SH2D1BO14796 132 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 RGS10O43665 173 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 IGKV1D-12P01611 117 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 CALCBP10092 127 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 BDKRB2P30411 391 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 ZP1P60852 638 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 RPS11P62280 158 aaKnown RBP eCLIP13.09□□□□□ -0.31
VAPA-204ENST00000577901 GUCA2AQ02747 115 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 SPHARQ15513 63 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 MED22Q15528 200 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 RNF144BQ7Z419 303 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 PDZD9Q8IXQ8 264 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 PXT1Q8NFP0 134 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 OR4M1Q8NGD0 313 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 OR52N4Q8NGI2 321 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 OR51A2Q8NGJ7 313 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 PPP1R35Q8TAP8 253 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 DPAGT1Q9H3H5 408 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 C19orf12Q9NSK7 152 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 PAK1IP1Q9NWT1 392 aaPredicted RBP13.09□□□□□ -0.31
VAPA-204ENST00000577901 GSTK1Q9Y2Q3 226 aa13.09□□□□□ -0.31
VAPA-204ENST00000577901 ZNF737O75373 536 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 GPX5O75715 221 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 TSPAN15O95858 294 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 GABRR1P24046 479 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 CRHBPP24387 322 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 EEF1B2P24534 225 aaKnown RBP13.08□□□□□ -0.32
VAPA-204ENST00000577901 DUSP1P28562 367 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 ZNF93P35789 620 aaPredicted RBP13.08□□□□□ -0.32
VAPA-204ENST00000577901 MTNR1BP49286 362 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 SNU13P55769 128 aaKnown RBP13.08□□□□□ -0.32
VAPA-204ENST00000577901 RBM48Q5RL73 367 aaKnown RBP13.08□□□□□ -0.32
VAPA-204ENST00000577901 NCR3LG1Q68D85 454 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 TMEM200BQ69YZ2 307 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 CRIP3Q6Q6R5 217 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 METAP1DQ6UB28 335 aaPredicted RBP13.08□□□□□ -0.32
VAPA-204ENST00000577901 GDPGP1Q6ZNW5 385 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 C1QL4Q86Z23 238 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 OR8H2Q8N162 312 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 Q8N7P7 452 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 TNFAIP8L1Q8WVP5 186 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 OR14A2Q96R54 314 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 S100A13Q99584 98 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 CCDC90BQ9GZT6 254 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 FAM192AQ9GZU8 254 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 Q9H521 79 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 EXOSC4Q9NPD3 245 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms