RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 SNU13P55769 128 aaKnown RBP15.85■□□□□ 0.13
SS18-208ENST00000577751 TPBGQ13641 420 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 RUSC1-AS1Q66K80 236 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 PHC2Q8IXK0 858 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 NKX3-1Q99801 234 aaPredicted RBP15.85■□□□□ 0.13
SS18-208ENST00000577751 CCDC90BQ9GZT6 254 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 METTL8Q9H825 291 aaKnown RBP15.85■□□□□ 0.13
SS18-208ENST00000577751 EXOSC4Q9NPD3 245 aaKnown RBP15.85■□□□□ 0.13
SS18-208ENST00000577751 SIRT7Q9NRC8 400 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 BLOC1S6Q9UL45 172 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 COL6A5A8TX70 2615 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 RNASEK-C17orf49H0YIS7 233 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 SC5DO75845 299 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 OR2H2O95918 312 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 MAPK3P27361 379 aaPredicted RBP15.84■□□□□ 0.13
SS18-208ENST00000577751 BLMHQ13867 455 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 ACSM3Q53FZ2 586 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 Q6P435 159 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 GDPD3Q7L5L3 318 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 LYPD6Q86Y78 171 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 CDH26Q8IXH8 852 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 OR4S1Q8NGB4 309 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 OR51T1Q8NGJ9 327 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 Q9H521 79 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 NOX4Q9NPH5 578 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 IL36GQ9NZH8 169 aa15.84■□□□□ 0.13
SS18-208ENST00000577751 A0A1W2PPH5 198 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 MGST3O14880 152 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 OR3A1P47881 315 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 GP2P55259 537 aaKnown RBP15.83■□□□□ 0.12
SS18-208ENST00000577751 DLX1P56177 255 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 MEF2CQ06413 473 aaPredicted RBP15.83■□□□□ 0.12
SS18-208ENST00000577751 MLLT11Q13015 90 aaPredicted RBP15.83■□□□□ 0.12
SS18-208ENST00000577751 ZNF273Q14593 569 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 INSL4Q14641 139 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 TBCEQ15813 527 aaPredicted RBP15.83■□□□□ 0.12
SS18-208ENST00000577751 GRK1Q15835 563 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 DEFB112Q30KQ8 113 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 RBMS3Q6XE24 437 aaKnown RBP15.83■□□□□ 0.12
SS18-208ENST00000577751 CHST4Q8NCG5 386 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 PPP1R35Q8TAP8 253 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 C1orf147Q96MC9 270 aaPredicted RBP15.83■□□□□ 0.12
SS18-208ENST00000577751 TMED9Q9BVK6 235 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 CHST6Q9GZX3 395 aa15.83■□□□□ 0.12
SS18-208ENST00000577751 A0A0G2JK05 382 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 TRIM77I1YAP6 450 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 SIRPB1O00241 398 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 CDRT1O95170 752 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 CCL3L1P16619 93 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 GABRR1P24046 479 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 ERP29P30040 261 aaKnown RBP15.82■□□□□ 0.12
SS18-208ENST00000577751 MAP2K4P45985 399 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 DLX6P56179 175 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 EDDM3BP56851 147 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 GABARAPL2P60520 117 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 GUCA2AQ02747 115 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 RSU1Q15404 277 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 LIPKQ5VXJ0 399 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 NCR3LG1Q68D85 454 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 HCP5Q6MZN7 132 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 TCF23Q7RTU1 214 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 PDZD9Q8IXQ8 264 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 PIP4P2Q8N4L2 257 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 UFD1Q92890 307 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 MGLLQ99685 303 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 C19orf24Q9BVV8 132 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 FAM192AQ9GZU8 254 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 METTL9Q9H1A3 318 aa15.82■□□□□ 0.12
SS18-208ENST00000577751 MDFIC2A0A1B0GVS7 189 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 C17orf98A8MV24 154 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 SLC33A1O00400 549 aaPredicted RBP15.81■□□□□ 0.12
SS18-208ENST00000577751 MRPS14O60783 128 aaKnown RBP15.81■□□□□ 0.12
SS18-208ENST00000577751 MAS1P04201 325 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 CSN2P05814 226 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 CPEP16870 476 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 EEF1B2P24534 225 aaKnown RBP15.81■□□□□ 0.12
SS18-208ENST00000577751 UBE2E1P51965 193 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 UBA52P62987 128 aaKnown RBP15.81■□□□□ 0.12
SS18-208ENST00000577751 PRB3Q04118 309 aaPredicted RBP15.81■□□□□ 0.12
SS18-208ENST00000577751 KLRD1Q13241 179 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 IL13RA2Q14627 380 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 OR10K1Q8NGX5 313 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 SPATA3Q8NHX4 192 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 FAM216AQ8WUB2 273 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 YTHDF1Q9BYJ9 559 aaKnown RBP15.81■□□□□ 0.12
SS18-208ENST00000577751 ACOT13Q9NPJ3 140 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 ING4Q9UNL4 249 aa15.81■□□□□ 0.12
SS18-208ENST00000577751 SF3B6Q9Y3B4 125 aaKnown RBP15.81■□□□□ 0.12
SS18-208ENST00000577751 DNAJC9-AS1A6NH13 148 aa15.8■□□□□ 0.12
SS18-208ENST00000577751 CLDN34H7C241 214 aa15.8■□□□□ 0.12
SS18-208ENST00000577751 DEGS1O15121 323 aa15.8■□□□□ 0.12
SS18-208ENST00000577751 HTR3BO95264 441 aa15.8■□□□□ 0.12
SS18-208ENST00000577751 HSMCR30P0CW71 290 aa15.8■□□□□ 0.12
SS18-208ENST00000577751 ZNF44P15621 663 aa15.8■□□□□ 0.12
SS18-208ENST00000577751 BAMBIQ13145 260 aa15.8■□□□□ 0.12
SS18-208ENST00000577751 EDDM3AQ14507 147 aa15.8■□□□□ 0.12
SS18-208ENST00000577751 NHLRC3Q5JS37 347 aa15.8■□□□□ 0.12
SS18-208ENST00000577751 FAM27D1Q5T7N8 215 aa15.8■□□□□ 0.12
SS18-208ENST00000577751 Q6YL49 198 aa15.8■□□□□ 0.12
SS18-208ENST00000577751 PPIL3Q9H2H8 161 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms