RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 IGHV2OR16-5A0A0B4J2B6 119 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 IGHV1-18A0A0C4DH31 117 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 MEIOCA2RUB1 952 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 TMEM235A6NFC5 223 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 ZNF732B4DXR9 585 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 DISC1C4P0D8 188 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 INMT-MINDY4F8WBC2 141 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 TPD52L2O43399 206 aaKnown RBP8.61□□□□□ -1.03
SS18-207ENST00000577636 AKR7A2O43488 359 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 SPRY1O43609 319 aaPredicted RBP8.61□□□□□ -1.03
SS18-207ENST00000577636 ANGPTL7O43827 346 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 TIMM8AO60220 97 aaPredicted RBP8.61□□□□□ -1.03
SS18-207ENST00000577636 HNRNPCP07910 306 aaKnown RBP eCLIP8.61□□□□□ -1.03
SS18-207ENST00000577636 MELTFP08582 738 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 PTHLHP12272 177 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 ZNF35P13682 527 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 TBPP20226 339 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 CA6P23280 308 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 GABRR1P24046 479 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 PTAFRP25105 342 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 CD40P25942 277 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 GIFP27352 417 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 BLVRBP30043 206 aaPredicted RBP8.61□□□□□ -1.03
SS18-207ENST00000577636 SRP14P37108 136 aaKnown RBP8.61□□□□□ -1.03
SS18-207ENST00000577636 HAAOP46952 286 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 PDLIM4P50479 330 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 ZP1P60852 638 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 BTG1P62324 171 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 GUCA2AQ02747 115 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 MEF2DQ14814 521 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 OR8G1Q15617 311 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 ZNF260Q3ZCT1 412 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 ACTBL2Q562R1 376 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 OLFML2AQ68BL7 652 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 STEAP1BQ6NZ63 245 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 ZNF782Q6ZMW2 699 aaPredicted RBP8.61□□□□□ -1.03
SS18-207ENST00000577636 SLC25A26Q70HW3 274 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 AKAP14Q86UN6 197 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 FAM89BQ8N5H3 189 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 CELF2-AS1Q8N7Q2 184 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 SPERTQ8NA61 448 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 TMEM229BQ8NBD8 167 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 KLF14Q8TD94 323 aaPredicted RBP8.61□□□□□ -1.03
SS18-207ENST00000577636 MARVELD1Q9BSK0 173 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 ADAT1Q9BUB4 502 aaKnown RBP8.61□□□□□ -1.03
SS18-207ENST00000577636 PLK3Q9H4B4 646 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 ZMAT3Q9HA38 289 aaKnown RBP8.61□□□□□ -1.03
SS18-207ENST00000577636 RHOFQ9HBH0 211 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 PLEKHJ1Q9NW61 149 aa8.61□□□□□ -1.03
SS18-207ENST00000577636 IGKV1-27A0A075B6S5 117 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 MEIS3P1A6NDR6 274 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A10PA6NDY2 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A18PA6NE21 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A16PA6NEW6 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A20PA6NIJ5 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A8PA6NJQ4 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A7PA6NKC0 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A22PA8MWA6 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A12PA8MX19 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A5PA8MXJ8 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 VSTM5A8MXK1 200 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A23PA8MXZ1 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 IQCF6A8MYZ5 107 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 SOCS1O15524 211 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 TCF21O43680 179 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 CA11O75493 328 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 RAB3DO95716 219 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 TCRBP04435 133 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 IFNA6P05013 189 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 H2AFB2P0C5Z0 115 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A15PP0C7V4 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A13PP0C7W8 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A14PP0C7W9 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 FAM90A24PP0C7X0 464 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 GNB3P16520 340 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 RAG2P55895 527 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 NAAAQ02083 359 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 CR1LQ2VPA4 569 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 MOGAT2Q3SYC2 334 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 PLA1AQ53H76 456 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 RNASE10Q5GAN6 216 aaKnown RBP8.6□□□□□ -1.03
SS18-207ENST00000577636 NKAPLQ5M9Q1 402 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 SFRP4Q6FHJ7 346 aaPredicted RBP8.6□□□□□ -1.03
SS18-207ENST00000577636 RGS7BPQ6MZT1 257 aaPredicted RBP8.6□□□□□ -1.03
SS18-207ENST00000577636 BTN2A1Q7KYR7 527 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 RNF144BQ7Z419 303 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 C1QL2Q7Z5L3 287 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 MYPOPQ86VE0 399 aaPredicted RBP8.6□□□□□ -1.03
SS18-207ENST00000577636 CADM3Q8N126 398 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 OR8G5Q8NG78 346 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 OR56B4Q8NH76 319 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 DACT3Q96B18 629 aaPredicted RBP8.6□□□□□ -1.03
SS18-207ENST00000577636 Q96M66 194 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 VRK1Q99986 396 aaPredicted RBP8.6□□□□□ -1.03
SS18-207ENST00000577636 NICN1Q9BSH3 213 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 PIMREGQ9BSJ6 248 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 PKIBQ9C010 78 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 POFUT1Q9H488 388 aa8.6□□□□□ -1.03
SS18-207ENST00000577636 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.6□□□□□ -1.03
SS18-207ENST00000577636 TMEM100Q9NV29 134 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms