RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 SERPINE3A8MV23 424 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 ZNF670-ZNF695F2Z2N8 137 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 SYT7O43581 403 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 ANXA8P13928 327 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 DUSP1P28562 367 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 PTGFRP43088 359 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 OR3A1P47881 315 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 RAB25P57735 213 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 RBM39Q14498 530 aaKnown RBP9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 ZNF146Q15072 292 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 UBE2V2Q15819 145 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 BAIAP2L2Q6UXY1 529 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 PLEKHG7Q6ZR37 379 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 ZNF695Q8IW36 515 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 SLC35F2Q8IXU6 374 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 FAM58AQ8N1B3 248 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 CCDC54Q8NEL0 328 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 OR4D6Q8NGJ1 314 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 ADI1Q9BV57 179 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 CHST5Q9GZS9 411 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 ZNF286AQ9HBT8 521 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 RBFOX1Q9NWB1 397 aaKnown RBP9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 SIRPB1O00241 398 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 SH2D1BO14796 132 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 MAGEB4O15481 346 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 ENTPD6O75354 484 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 DCTN3O75935 186 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 KRT8P05787 483 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 HOXB6P17509 224 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 PRKACAP17612 351 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 NPBWR2P48146 333 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 RBP2P50120 134 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 SNU13P55769 128 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 ODF4Q2M2E3 257 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 TMEM179BQ7Z7N9 219 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 THNSL2Q86YJ6 484 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 FOXRED2Q8IWF2 684 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 DNAJC9Q8WXX5 260 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 PP6455Q8WZ26 134 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 CORO2AQ92828 525 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 TOMM40LQ969M1 308 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 RPEQ96AT9 228 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 EXOSC4Q9NPD3 245 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 ZNF446Q9NWS9 450 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 CLN6Q9NWW5 311 aa9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 H2AFY2Q9P0M6 372 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 MRM2Q9UI43 246 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 AMMECR1Q9Y4X0 333 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 LSM4Q9Y4Z0 139 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-212ENST00000576613 A0A087X0M5 115 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 A0A1B0GX30 115 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 ODAMA1E959 279 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 B2RBV5 119 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 LY6LH3BQJ8 138 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 CCL24O00175 119 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 RPP14O95059 124 aaKnown RBP9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 BCL3P20749 454 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 POU3F4P49335 361 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 ATP1B3P54709 279 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 MTCP1P56278 107 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 MS4A2Q01362 244 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 AESQ08117 197 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 HES1Q14469 280 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 NKAPLQ5M9Q1 402 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 C9orf66Q5T8R8 295 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 C18orf65Q6ZTR6 163 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 MEPCEQ7L2J0 689 aaKnown RBP9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 SLC35E3Q7Z769 313 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 C5orf56Q8N8D9 126 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 YIPF7Q8N8F6 280 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 DNAAF1Q8NEP3 725 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 OR5M8Q8NGP6 311 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 OR56B4Q8NH76 319 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 OR9G1Q8NH87 305 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 C10orf35Q96D05 121 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 ASB9Q96DX5 294 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 NOL4LQ96MY1 436 aaPredicted RBP9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 ADGRL4Q9HBW9 690 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 GSTK1Q9Y2Q3 226 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 ARL2BPQ9Y2Y0 163 aa9.2□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM90A18PA6NE21 464 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM90A16PA6NEW6 464 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM90A20PA6NIJ5 464 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 ZNF729A6NN14 1252 aaPredicted RBP9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM90A9PA6NNJ1 464 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM90A12PA8MX19 464 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM90A5PA8MXJ8 464 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 H3BSH0 61 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 FGF16O43320 207 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 PRKYO43930 277 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 OR2H2O95918 312 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 CSN2P05814 226 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 SNRNP70P08621 437 aaKnown RBP9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM90A15PP0C7V4 464 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM90A13PP0C7W8 464 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM90A14PP0C7W9 464 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 FAM90A24PP0C7X0 464 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 TMEM11P17152 192 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 PRKACGP22612 351 aa9.19□□□□□ -0.94
CTDNEP1-212ENST00000576613 GDNFP39905 211 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms