RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 FAHD2BQ6P2I3 314 aaPredicted RBP24.72■■□□□ 1.55
CTDNEP1-208ENST00000573600 SLC25A42Q86VD7 318 aa24.72■■□□□ 1.55
CTDNEP1-208ENST00000573600 LHFPL1Q86WI0 220 aa24.72■■□□□ 1.55
CTDNEP1-208ENST00000573600 OR52B4Q8NGK2 314 aa24.72■■□□□ 1.55
CTDNEP1-208ENST00000573600 ZNF431Q8TF32 576 aaPredicted RBP24.72■■□□□ 1.55
CTDNEP1-208ENST00000573600 TMEM171Q8WVE6 324 aa24.72■■□□□ 1.55
CTDNEP1-208ENST00000573600 FAHD2AQ96GK7 314 aa24.72■■□□□ 1.55
CTDNEP1-208ENST00000573600 RP1L1Q8IWN7 2480 aaPredicted RBP24.71■■□□□ 1.55
CTDNEP1-208ENST00000573600 RBM39Q14498 530 aaKnown RBP24.71■■□□□ 1.55
CTDNEP1-208ENST00000573600 NOXA1Q86UR1 476 aa24.71■■□□□ 1.55
CTDNEP1-208ENST00000573600 KDF1Q8NAX2 398 aaPredicted RBP24.71■■□□□ 1.55
CTDNEP1-208ENST00000573600 POC1AQ8NBT0 407 aa24.71■■□□□ 1.55
CTDNEP1-208ENST00000573600 NUP37Q8NFH4 326 aa24.71■■□□□ 1.55
CTDNEP1-208ENST00000573600 CAPSLQ8WWF8 208 aa24.71■■□□□ 1.55
CTDNEP1-208ENST00000573600 GTF3AQ92664 365 aaKnown RBP24.71■■□□□ 1.55
CTDNEP1-208ENST00000573600 NECAP2Q9NVZ3 263 aa24.71■■□□□ 1.55
CTDNEP1-208ENST00000573600 IGLV3-9A0A075B6K5 115 aa24.7■■□□□ 1.54
CTDNEP1-208ENST00000573600 SDCBPO00560 298 aaPredicted RBP24.7■■□□□ 1.54
CTDNEP1-208ENST00000573600 C1QBP02746 253 aa24.7■■□□□ 1.54
CTDNEP1-208ENST00000573600 ASCL1P50553 236 aa24.7■■□□□ 1.54
CTDNEP1-208ENST00000573600 SELENOVP59797 346 aa24.7■■□□□ 1.54
CTDNEP1-208ENST00000573600 MSMPQ1L6U9 139 aa24.7■■□□□ 1.54
CTDNEP1-208ENST00000573600 FIP1L1Q6UN15 594 aaKnown RBP24.7■■□□□ 1.54
CTDNEP1-208ENST00000573600 WFDC8Q8IUA0 241 aa24.7■■□□□ 1.54
CTDNEP1-208ENST00000573600 RIMS4Q9H426 269 aaPredicted RBP24.7■■□□□ 1.54
CTDNEP1-208ENST00000573600 CHMP1AQ9HD42 196 aaPredicted RBP24.7■■□□□ 1.54
CTDNEP1-208ENST00000573600 OSGIN2Q9Y236 505 aa24.7■■□□□ 1.54
CTDNEP1-208ENST00000573600 NXPH2O95156 264 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 DUSP1P28562 367 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 ECI1P42126 302 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 TAS2R31P59538 309 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 C11orf53Q8IXP5 236 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 MUC20Q8N307 709 aaPredicted RBP24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 SUMF2Q8NBJ7 301 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 MARCH1Q8TCQ1 289 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 NEK7Q8TDX7 302 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 NPTNQ9Y639 398 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 SHANK1Q9Y566 2161 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 DEGS1O15121 323 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 FPR2P25090 351 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 CD200P41217 278 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 NKX2-5P52952 324 aaPredicted RBP24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 SPIN3Q5JUX0 258 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 Q6ZS49 121 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 LRP11Q86VZ4 500 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 HES4Q9HCC6 221 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 GPR132Q9UNW8 380 aa24.69■■□□□ 1.54
CTDNEP1-208ENST00000573600 FAM221AA4D161 298 aa24.68■■□□□ 1.54
CTDNEP1-208ENST00000573600 CCL21O00585 134 aa24.68■■□□□ 1.54
CTDNEP1-208ENST00000573600 THBDP07204 575 aa24.68■■□□□ 1.54
CTDNEP1-208ENST00000573600 SURF2Q15527 256 aaPredicted RBP24.68■■□□□ 1.54
CTDNEP1-208ENST00000573600 VHLLQ6RSH7 139 aa24.68■■□□□ 1.54
CTDNEP1-208ENST00000573600 ZNF436Q9C0F3 470 aaPredicted RBP24.68■■□□□ 1.54
CTDNEP1-208ENST00000573600 NGBQ9NPG2 151 aa24.68■■□□□ 1.54
CTDNEP1-208ENST00000573600 MGAT4CQ9UBM8 478 aa24.68■■□□□ 1.54
CTDNEP1-208ENST00000573600 PLSCR5A0PG75 271 aa24.67■■□□□ 1.54
CTDNEP1-208ENST00000573600 NAPSAO96009 420 aa24.67■■□□□ 1.54
CTDNEP1-208ENST00000573600 LY6DQ14210 128 aa24.67■■□□□ 1.54
CTDNEP1-208ENST00000573600 ZNF146Q15072 292 aa24.67■■□□□ 1.54
CTDNEP1-208ENST00000573600 Q6P435 159 aa24.67■■□□□ 1.54
CTDNEP1-208ENST00000573600 SLC22A25Q6T423 547 aa24.67■■□□□ 1.54
CTDNEP1-208ENST00000573600 PEG10Q86TG7 708 aaKnown RBP24.67■■□□□ 1.54
CTDNEP1-208ENST00000573600 DPCDQ9BVM2 203 aaPredicted RBP24.67■■□□□ 1.54
CTDNEP1-208ENST00000573600 TRAV24A0A0B4J272 114 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 MED19A0JLT2 244 aaPredicted RBP24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 A6NLC8 198 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 ZNF44P15621 663 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 CHRNB4P30926 498 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 UBE2MP61081 183 aaKnown RBP24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 AADACL3Q5VUY0 350 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 C17orf107Q6ZR85 190 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 OR2Z1Q8NG97 314 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 FN3KRPQ9HA64 309 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 ERVH48-1M5A8F1 160 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 OR5H8P0DN80 308 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 ERP29P30040 261 aaKnown RBP24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 NPY4RP50391 375 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 PRAMEF6Q5VXH4 476 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 SYT3Q9BQG1 590 aa24.66■■□□□ 1.54
CTDNEP1-208ENST00000573600 IGHV3-64DA0A0J9YX35 117 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 HS3ST1O14792 307 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 SH2D1BO14796 132 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 PTBP3O95758 552 aaKnown RBP24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 MDH2P40926 338 aaKnown RBP24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 GZMKP49863 264 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 DHRS2Q13268 280 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 WDR82Q6UXN9 313 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 LYG2Q86SG7 212 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 C12orf45Q8N5I9 185 aaPredicted RBP24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 TMEM185AQ8NFB2 350 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 OR2AK2Q8NG84 335 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 ZNF2Q9BSG1 426 aaPredicted RBP24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 Q9N2K0 584 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 COQ3Q9NZJ6 369 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 GLS2Q9UI32 602 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 NCOR2Q9Y618 2525 aa24.65■■□□□ 1.54
CTDNEP1-208ENST00000573600 DPRXA6NFQ7 191 aa24.64■■□□□ 1.54
CTDNEP1-208ENST00000573600 POM121CA8CG34 1229 aa24.64■■□□□ 1.54
CTDNEP1-208ENST00000573600 FABP7O15540 132 aa24.64■■□□□ 1.54
CTDNEP1-208ENST00000573600 ZBTB25P24278 435 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms