RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 KDM4BO94953 1096 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 MT-ND2P03891 347 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 PRKACBP22694 351 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 LMO1P25800 156 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 ERP29P30040 261 aaKnown RBP14.54□□□□□ -0.08
CHD3-214ENST00000572579 GLIPR1P48060 266 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 ALDH3A2P51648 485 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 BEAN1Q3B7T3 259 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 C11orf88Q6PI97 169 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 Q8IYB0 196 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 ENTHD1Q8IYW4 607 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 ACBD7Q8N6N7 88 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 ZNF676Q8N7Q3 588 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 OR5D18Q8NGL1 313 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 OPALINQ96PE5 141 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 TMEM133Q9H2Q1 129 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 GSTK1Q9Y2Q3 226 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 A0A0G2JK05 382 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 MGST3O14880 152 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 HTR1AP08908 422 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 CD24P25063 80 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 P2RX3P56373 397 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 ZP1P60852 638 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 ALKBH1Q13686 389 aaKnown RBP14.53□□□□□ -0.08
CHD3-214ENST00000572579 CDK5R1Q15078 307 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 TMEM95Q3KNT9 176 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 KPRPQ5T749 579 aaPredicted RBP14.53□□□□□ -0.08
CHD3-214ENST00000572579 SAMD5Q5TGI4 173 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 MINOS1Q5TGZ0 78 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 PRAMEF5Q5TYX0 476 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 MEDAGQ5VYS4 303 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 LHFPL2Q6ZUX7 228 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 OR13C9Q8NGT0 318 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 RHOXF1Q8NHV9 184 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 RPS4Y2Q8TD47 263 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 SPSB1Q96BD6 273 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 FOXRED1Q96CU9 486 aaPredicted RBP14.53□□□□□ -0.08
CHD3-214ENST00000572579 OR5M11Q96RB7 305 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 AMBNQ9NP70 447 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 HHLA2Q9UM44 414 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 MINOS1-NBL1R4GNA1 71 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 DSCAML1Q8TD84 2053 aa14.53□□□□□ -0.08
CHD3-214ENST00000572579 ZFPL1O95159 310 aa14.52□□□□□ -0.09
CHD3-214ENST00000572579 PRB2P02812 416 aaPredicted RBP14.52□□□□□ -0.09
CHD3-214ENST00000572579 ZNF20P17024 532 aa14.52□□□□□ -0.09
CHD3-214ENST00000572579 AESQ08117 197 aa14.52□□□□□ -0.09
CHD3-214ENST00000572579 GALEQ14376 348 aa14.52□□□□□ -0.09
CHD3-214ENST00000572579 SPIN3Q5JUX0 258 aa14.52□□□□□ -0.09
CHD3-214ENST00000572579 CORO2AQ92828 525 aa14.52□□□□□ -0.09
CHD3-214ENST00000572579 COQ2Q96H96 371 aa14.52□□□□□ -0.09
CHD3-214ENST00000572579 CITED2Q99967 270 aaPredicted RBP14.52□□□□□ -0.09
CHD3-214ENST00000572579 OCSTAMPQ9BR26 566 aa14.52□□□□□ -0.09
CHD3-214ENST00000572579 COMMD4Q9H0A8 199 aa14.52□□□□□ -0.09
CHD3-214ENST00000572579 TET2Q6N021 2002 aaPredicted RBP14.51□□□□□ -0.09
CHD3-214ENST00000572579 FAM172BPA6NC97 362 aa14.51□□□□□ -0.09
CHD3-214ENST00000572579 DBTP11182 482 aaKnown RBP14.51□□□□□ -0.09
CHD3-214ENST00000572579 SLC34A1Q06495 639 aa14.51□□□□□ -0.09
CHD3-214ENST00000572579 ABHD12Q8N2K0 398 aa14.51□□□□□ -0.09
CHD3-214ENST00000572579 OR13C3Q8NGS6 347 aa14.51□□□□□ -0.09
CHD3-214ENST00000572579 APH1BQ8WW43 257 aa14.51□□□□□ -0.09
CHD3-214ENST00000572579 PDCD1LG2Q9BQ51 273 aa14.51□□□□□ -0.09
CHD3-214ENST00000572579 ALG8Q9BVK2 526 aa14.51□□□□□ -0.09
CHD3-214ENST00000572579 CLEC7AQ9BXN2 247 aa14.51□□□□□ -0.09
CHD3-214ENST00000572579 MMP28Q9H239 520 aa14.51□□□□□ -0.09
CHD3-214ENST00000572579 ZCCHC4Q9H5U6 513 aa14.51□□□□□ -0.09
CHD3-214ENST00000572579 ABCB10Q9NRK6 738 aa14.51□□□□□ -0.09
CHD3-214ENST00000572579 UBE2J1Q9Y385 318 aaPredicted RBP14.51□□□□□ -0.09
CHD3-214ENST00000572579 SLC33A1O00400 549 aaPredicted RBP14.5□□□□□ -0.09
CHD3-214ENST00000572579 SH2D1BO14796 132 aa14.5□□□□□ -0.09
CHD3-214ENST00000572579 IGLV1-47P01700 117 aa14.5□□□□□ -0.09
CHD3-214ENST00000572579 CGB3P0DN86 165 aa14.5□□□□□ -0.09
CHD3-214ENST00000572579 CGB7P0DN87 165 aa14.5□□□□□ -0.09
CHD3-214ENST00000572579 CDK2P24941 298 aa14.5□□□□□ -0.09
CHD3-214ENST00000572579 IL18R1Q13478 541 aa14.5□□□□□ -0.09
CHD3-214ENST00000572579 C17orf58Q2M2W7 97 aa14.5□□□□□ -0.09
CHD3-214ENST00000572579 NSUN5P1Q3KNT7 163 aa14.5□□□□□ -0.09
CHD3-214ENST00000572579 NDNFQ8TB73 568 aa14.5□□□□□ -0.09
CHD3-214ENST00000572579 RGP1Q92546 391 aaPredicted RBP14.5□□□□□ -0.09
CHD3-214ENST00000572579 ZNF286AQ9HBT8 521 aa14.5□□□□□ -0.09
CHD3-214ENST00000572579 EXOSC4Q9NPD3 245 aaKnown RBP14.5□□□□□ -0.09
CHD3-214ENST00000572579 ERVK13-1Q9NX77 482 aa14.5□□□□□ -0.09
CHD3-214ENST00000572579 LY6LH3BQJ8 138 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 AMY1AP04745 511 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 AMY2AP04746 511 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 HTR1DP28221 377 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 GTF2A1P52655 376 aaPredicted RBP14.49□□□□□ -0.09
CHD3-214ENST00000572579 BDH1Q02338 343 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 SCN1BQ07699 218 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 TCTEX1D4Q5JR98 221 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 ZNF529Q6P280 563 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 HEPN1Q6WQI6 88 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 SAXO1Q8IYX7 474 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 PARP16Q8N5Y8 322 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 PRSS22Q9GZN4 317 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 PPIL3Q9H2H8 161 aaKnown RBP14.49□□□□□ -0.09
CHD3-214ENST00000572579 ING3Q9NXR8 418 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 ZNF581Q9P0T4 197 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 GMPPBQ9Y5P6 360 aa14.49□□□□□ -0.09
CHD3-214ENST00000572579 ODAMA1E959 279 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 F2RL2O00254 374 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms