RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 WDR82Q6UXN9 313 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 RBMS3Q6XE24 437 aaKnown RBP12.5□□□□□ -0.41
RAB40B-203ENST00000570676 CALHM1Q8IU99 346 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 CROCCP3Q8IVE0 287 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 SCCPDHQ8NBX0 429 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 OR4D6Q8NGJ1 314 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 OR6M1Q8NGM8 313 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 LRRC29Q8WV35 223 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 TNFAIP8L1Q8WVP5 186 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 BARHL1Q9BZE3 327 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 DAPK2Q9UIK4 370 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 MRPS28Q9Y2Q9 187 aaKnown RBP12.5□□□□□ -0.41
RAB40B-203ENST00000570676 IGHV3OR15-7A0A075B7D8 119 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 MDFIC2A0A1B0GVS7 189 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 A0A1B0GW55 424 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 CLDN34H7C241 214 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 J3QT63 122 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 SPRY1O43609 319 aaPredicted RBP12.49□□□□□ -0.41
RAB40B-203ENST00000570676 GYPAP02724 150 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 RNASE1P07998 156 aaKnown RBP12.49□□□□□ -0.41
RAB40B-203ENST00000570676 DUX4L2P0CJ85 424 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 DUX4L3P0CJ86 424 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 DUX4L4P0CJ87 422 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 DUX4L5P0CJ88 424 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 DUX4L6P0CJ89 424 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 DUX4L7P0CJ90 424 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 HKR1P10072 659 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 SLC2A2P11168 524 aaPredicted RBP12.49□□□□□ -0.41
RAB40B-203ENST00000570676 MMP9P14780 707 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 SOX6P35712 828 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 CFHR2P36980 270 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 PTGFRP43088 359 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 ZP1P60852 638 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 PDZK1IP1Q13113 114 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 BAMBIQ13145 260 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 P2RY14Q15391 338 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 IDNKQ5T6J7 187 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 AWAT2Q6E213 333 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 DUX4L9Q6RFH8 374 aaPredicted RBP12.49□□□□□ -0.41
RAB40B-203ENST00000570676 BRD3OSQ6XYD6 125 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 SLC25A26Q70HW3 274 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 PKIBQ9C010 78 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 CCDC59Q9P031 241 aaKnown RBP12.49□□□□□ -0.41
RAB40B-203ENST00000570676 KAAG1Q9UBP8 84 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 DUX4Q9UBX2 424 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 STEAP1Q9UHE8 339 aa12.49□□□□□ -0.41
RAB40B-203ENST00000570676 SRRM5B3KS81 715 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 CDIPTO14735 213 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 NDUFA2O43678 99 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 SYNGR1O43759 233 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 ANGPTL7O43827 346 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 CYB5AP00167 134 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 SFTPBP07988 381 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 CLDN12P56749 244 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 SLC9A3R2Q15599 337 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 CNPY1Q3B7I2 92 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 MKXQ8IYA7 352 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 FGFRL1Q8N441 504 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 ZSCAN4Q8NAM6 433 aaPredicted RBP12.48□□□□□ -0.41
RAB40B-203ENST00000570676 AQP3Q92482 292 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 SLC25A28Q96A46 364 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 TBX15Q96SF7 602 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 S100A13Q99584 98 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 PRDM13Q9H4Q3 707 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 ELL3Q9HB65 397 aaPredicted RBP12.48□□□□□ -0.41
RAB40B-203ENST00000570676 ING4Q9UNL4 249 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 POLDIP2Q9Y2S7 368 aa12.48□□□□□ -0.41
RAB40B-203ENST00000570676 A0A0B4J203 849 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 DVL1O14640 695 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 RHBDL1O75783 438 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 MPZP25189 248 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 RANBP1P43487 201 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 IL24Q13007 206 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 DGUOKQ16854 277 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 CD276Q5ZPR3 534 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 GLIPR1L1Q6UWM5 242 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 SAXO1Q8IYX7 474 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 C3orf56Q8N813 242 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 ZNF671Q8TAW3 534 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 SLAMF9Q96A28 289 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 SEH1LQ96EE3 360 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 SIRPDQ9H106 197 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 LIN7BQ9HAP6 207 aa12.47□□□□□ -0.41
RAB40B-203ENST00000570676 IGKV1-12A0A0C4DH73 117 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 TMPRSS2O15393 492 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 TMEM127O75204 238 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 BPNT1O95861 308 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 IGKV1D-12P01611 117 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 UBBP0CG47 229 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 SNRPBP14678 240 aaKnown RBP12.46□□□□□ -0.41
RAB40B-203ENST00000570676 ARSBP15848 533 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 MUC1P15941 1255 aaPredicted RBP12.46□□□□□ -0.41
RAB40B-203ENST00000570676 AMY2BP19961 511 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 RSU1Q15404 277 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 DEFB112Q30KQ8 113 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 GPR157Q5UAW9 335 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 ASCL4Q6XD76 172 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 FAM216BQ8N7L0 139 aa12.46□□□□□ -0.41
RAB40B-203ENST00000570676 PXT1Q8NFP0 134 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 1208.3 ms