RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 NINJ1Q92982 152 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 YIPF5Q969M3 257 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 SLC25A38Q96DW6 304 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 Q96M66 194 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 C1orf147Q96MC9 270 aaPredicted RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 WDFY2Q96P53 400 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 TSC22D3Q99576 134 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 WNT10AQ9GZT5 417 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 NXF2Q9GZY0 626 aaKnown RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 WDR13Q9H1Z4 485 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 LIME1Q9H400 295 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 HES4Q9HCC6 221 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 CHMP1AQ9HD42 196 aaPredicted RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 PLEKHJ1Q9NW61 149 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 IL36RNQ9UBH0 155 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 RABL2AQ9UBK7 228 aaPredicted RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 RABL2BQ9UNT1 228 aa5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 POLR3KQ9Y2Y1 108 aaPredicted RBP5.53□□□□□ -1.52
CTDNEP1-204ENST00000570484 CACNA1CQ13936 2221 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 USP9XQ93008 2570 aaPredicted RBP5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 TRAV18A0A075B6X5 111 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 RFPL4AA6NLU0 287 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 SERPINE3A8MV23 424 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 MCRIP1C9JLW8 97 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 RFPL4AL1F8VTS6 287 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 F8VVB4 439 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 F8VWA3 439 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 LYNX1G3V0Z9 82 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 CTDSP2O14595 271 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 LDLRAD4O15165 306 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 ADAM20O43506 726 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 NDUFA2O43678 99 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 NDUFS7O75251 213 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 RP2O75695 350 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF205O95201 554 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR2H2O95918 312 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 GYPAP02724 150 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 CD3GP09693 182 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 LYNX1P0DP58 116 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 HIST1H1DP16402 221 aaKnown RBP5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 ELK1P19419 428 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 FUT3P21217 361 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 CDK2P24941 298 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 DUSP1P28562 367 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 PMELP40967 661 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 TMEM33P57088 247 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 GNG2P59768 71 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 IL13RA1P78552 427 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 QRFPP83859 136 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 PITPNAQ00169 270 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 ARFRP1Q13795 201 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF146Q15072 292 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZMYND11Q15326 602 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 LRRC10Q5BKY1 277 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 FAM201AQ5SY85 155 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 TEX36Q5VZQ5 186 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 STUMQ69YW2 141 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 DCDC5Q6ZRR9 648 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 SNX29P2Q8IUI4 249 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 C11orf53Q8IXP5 236 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 IZUMO1Q8IYV9 350 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 CMTM4Q8IZR5 234 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 LRRC75A-AS1Q8N1F1 130 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF561Q8N587 486 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 C19orf18Q8NEA5 215 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR4M1Q8NGD0 313 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR8B3Q8NGG8 313 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR6Q1Q8NGQ2 317 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR10R2Q8NGX6 335 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 MED30Q96HR3 178 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 LURAP1Q96LR2 239 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR8B2Q96RD0 313 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 NUDT16L1Q9BRJ7 211 aaKnown RBP5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 NICN1Q9BSH3 213 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 TM2D1Q9BX74 207 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 WDR12Q9GZL7 423 aaKnown RBP5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 LPAR5Q9H1C0 372 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 ABCG5Q9H222 651 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 NARFLQ9H6Q4 476 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF665Q9H7R5 613 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF701Q9NV72 531 aaPredicted RBP5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 DCAF16Q9NXF7 216 aa5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 MRPS7Q9Y2R9 242 aaKnown RBP5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 DIDO1Q9BTC0 2240 aaKnown RBP5.52□□□□□ -1.53
CTDNEP1-204ENST00000570484 FUOMA2VDF0 154 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 TMEM235A6NFC5 223 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 FABP12A6NFH5 140 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 H7C1Q1 480 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 XRCC3O43542 346 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 NDUFB3O43676 98 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 LHBP01229 141 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 IGHV2-70P01814 119 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 PSG2P11465 335 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 PAX1P15863 534 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 NDUFB7P17568 137 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 COL8A2P25067 703 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 CHATP28329 748 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 PRDX2P32119 198 aa5.51□□□□□ -1.53
CTDNEP1-204ENST00000570484 TNFSF8P32971 234 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms