RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 OSR2Q8N2R0 312 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 PRSS35Q8N3Z0 413 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 KLHL30-AS1Q8NEE0 82 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 LEAP2Q969E1 77 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 ASB9Q96DX5 294 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 RBMXL1Q96E39 390 aaKnown RBP9.56□□□□□ -0.88
CAPN3-220ENST00000569827 NSL1Q96IY1 281 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 SPACA5Q96QH8 159 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 PRR25Q96S07 402 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 ASCL2Q99929 193 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 TEX12Q9BXU0 123 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 CHST5Q9GZS9 411 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 PPIL3Q9H2H8 161 aaKnown RBP9.56□□□□□ -0.88
CAPN3-220ENST00000569827 PAPOLBQ9NRJ5 636 aaKnown RBP9.56□□□□□ -0.88
CAPN3-220ENST00000569827 HHLA2Q9UM44 414 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 GSTK1Q9Y2Q3 226 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 IGKV1-9A0A0C4DH69 117 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 IGKV1-12A0A0C4DH73 117 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 LOC107986453A0A1B0GWG9 222 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 LEUTXA8MZ59 168 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 MGST3O14880 152 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 OR2H2O95918 312 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 IGKV1D-12P01611 117 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 T-ENOLP0DO92 83 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 ANXA8P13928 327 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 NFYBP25208 207 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 KIR3DL2P43630 455 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 FUT6P51993 359 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 BDH1Q02338 343 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 GK3PQ14409 553 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 HNF4GQ14541 408 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 ATXN7L3Q14CW9 347 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-220ENST00000569827 HLA-DRB5Q30154 266 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 OR2W3Q7Z3T1 314 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 SPATA24Q86W54 205 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 OR5D18Q8NGL1 313 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 OR56B4Q8NH76 319 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 ADAT3Q96EY9 351 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-220ENST00000569827 THTPAQ9BU02 230 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 CLN6Q9NWW5 311 aa9.55□□□□□ -0.88
CAPN3-220ENST00000569827 GAR1Q9NY12 217 aaKnown RBP9.55□□□□□ -0.88
CAPN3-220ENST00000569827 UBE2J1Q9Y385 318 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-220ENST00000569827 TRGV10A0A0A0MS01 117 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 TRBV2A0A0J9YWF9 115 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 DHRS7CA6NNS2 312 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 H0YHG0 523 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 BUB1B-PAK6H3BSN5 160 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 HSPB6O14558 160 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 FKBP6O75344 327 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 GATBO75879 557 aaKnown RBP9.54□□□□□ -0.88
CAPN3-220ENST00000569827 KRT8P05787 483 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 KPNB1Q14974 876 aaKnown RBP9.54□□□□□ -0.88
CAPN3-220ENST00000569827 LTC4SQ16873 150 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 TP53I3Q53FA7 332 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 NKAPLQ5M9Q1 402 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 AADACL4Q5VUY2 407 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 HEPN1Q6WQI6 88 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 ZBTB49Q6ZSB9 765 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 ARHGAP24Q8N264 748 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 OR51D1Q8NGF3 324 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 ZNF596Q8TC21 504 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 ITFG2Q969R8 447 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 COQ2Q96H96 371 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 GAL3ST2Q9H3Q3 398 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 EXOSC4Q9NPD3 245 aaKnown RBP9.54□□□□□ -0.88
CAPN3-220ENST00000569827 H2AFY2Q9P0M6 372 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-220ENST00000569827 MOB4Q9Y3A3 225 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 HSPE1-MOB4S4R3N1 261 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 U3KQK5 164 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 DNAH1Q9P2D7 4330 aa9.54□□□□□ -0.88
CAPN3-220ENST00000569827 A0A1W2PQL4 384 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-220ENST00000569827 LINC01548A6NM66 108 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 LY6LH3BQJ8 138 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 H3BUI4 141 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 TOR1AO14656 332 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 ZNF44P15621 663 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 PTGFRP43088 359 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 RBP2P50120 134 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 GNG10P50151 68 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 MNAT1P51948 309 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 MTCP1P56278 107 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 HES1Q14469 280 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 C17orf58Q2M2W7 97 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 NXNL2Q5VZ03 156 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 RTN4RL2Q86UN3 420 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 DRAM1Q8N682 238 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 OR10H4Q8NGA5 316 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 OR10AC1Q8NH08 325 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 TMEM163Q8TC26 289 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 TOMM40LQ969M1 308 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 ADI1Q9BV57 179 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-220ENST00000569827 PCDHGB5Q9Y5G0 923 aa9.53□□□□□ -0.88
CAPN3-220ENST00000569827 EPPK1P58107 5090 aaKnown RBP9.52□□□□□ -0.88
CAPN3-220ENST00000569827 TRAV39A0A0B4J263 110 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 A0A1W2PPE3 182 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 ODAMA1E959 279 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 AQP12BA6NM10 295 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 SERPINE3A8MV23 424 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 ATF1P18846 271 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms