RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 NDUFB3O43676 98 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 ECDO95905 644 aaPredicted RBP19.56■□□□□ 0.72
RAB40C-212ENST00000569575 IGHV2-5P01817 119 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 CSN2P05814 226 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 IKZF1Q13422 519 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 Q6P435 159 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 CD177Q8N6Q3 437 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 OR5T2Q8NGG2 359 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 CLDND2Q8NHS1 167 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 FAM46BQ96A09 425 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 SEH1LQ96EE3 360 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 LPAR5Q9H1C0 372 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 ABCG5Q9H222 651 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 BANF2Q9H503 90 aa19.56■□□□□ 0.72
RAB40C-212ENST00000569575 FUOMA2VDF0 154 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 K7N7A8 449 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 GEMIN2O14893 280 aaKnown RBP19.55■□□□□ 0.72
RAB40C-212ENST00000569575 CA11O75493 328 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 OR7C1O76099 320 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-212ENST00000569575 OR2H2O95918 312 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 ZNF44P15621 663 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 FUT3P21217 361 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 LMO4P61968 165 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 PAX5Q02548 391 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 TAF9Q16594 264 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 PIGYQ3MUY2 71 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 ESCO2Q56NI9 601 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 CD276Q5ZPR3 534 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 SPNS3Q6ZMD2 512 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 C19orf18Q8NEA5 215 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 LGALS14Q8TCE9 139 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 PHF21AQ96BD5 680 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 C1orf159Q96HA4 380 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 GAFA1Q96PS6 74 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 CCL13Q99616 98 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 NCOR1P1Q9H4R4 102 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 RCC2Q9P258 522 aaKnown RBP19.55■□□□□ 0.72
RAB40C-212ENST00000569575 HSF4Q9ULV5 492 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 MAB21L2Q9Y586 359 aa19.55■□□□□ 0.72
RAB40C-212ENST00000569575 A0A096LNT2 108 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 A0A1W2PP11 408 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 POM121CA8CG34 1229 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 ZNF737O75373 536 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 APOA1P02647 267 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 SNRPBP14678 240 aaKnown RBP19.54■□□□□ 0.72
RAB40C-212ENST00000569575 AMY2BP19961 511 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 PITPNBP48739 271 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 COL10A1Q03692 680 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 UBE2NLQ5JXB2 153 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 OR10K2Q6IF99 312 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 S100A16Q96FQ6 103 aaKnown RBP19.54■□□□□ 0.72
RAB40C-212ENST00000569575 NEDD4LQ96PU5 975 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 MMP27Q9H306 513 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 RHBDL2Q9NX52 303 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 CLN8Q9UBY8 286 aa19.54■□□□□ 0.72
RAB40C-212ENST00000569575 POLR3KQ9Y2Y1 108 aaPredicted RBP19.54■□□□□ 0.72
RAB40C-212ENST00000569575 IGHV4-61A0A0C4DH41 118 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 A8MXK9 166 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 PDCD6O75340 191 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 FOXH1O75593 365 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 TPPPO94811 219 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 TK1P04183 234 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 ERP29P30040 261 aaKnown RBP19.53■□□□□ 0.72
RAB40C-212ENST00000569575 OR8H2Q8N162 312 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 BATF2Q8N1L9 274 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 WFDC11Q8NEX6 87 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 SLIRPQ9GZT3 109 aaKnown RBP19.53■□□□□ 0.72
RAB40C-212ENST00000569575 NXF2Q9GZY0 626 aaKnown RBP19.53■□□□□ 0.72
RAB40C-212ENST00000569575 DIABLOQ9NR28 239 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 IL36RNQ9UBH0 155 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 SLC25A10Q9UBX3 287 aaPredicted RBP19.53■□□□□ 0.72
RAB40C-212ENST00000569575 LPAR3Q9UBY5 353 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 ADAM30Q9UKF2 790 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 ITGB1BP2Q9UKP3 347 aa19.53■□□□□ 0.72
RAB40C-212ENST00000569575 DOCK11Q5JSL3 2073 aa19.52■□□□□ 0.72
RAB40C-212ENST00000569575 MCRIP1C9JLW8 97 aa19.52■□□□□ 0.72
RAB40C-212ENST00000569575 H7C1Q1 480 aa19.52■□□□□ 0.72
RAB40C-212ENST00000569575 SLC33A1O00400 549 aaPredicted RBP19.52■□□□□ 0.72
RAB40C-212ENST00000569575 MGST3O14880 152 aa19.52■□□□□ 0.72
RAB40C-212ENST00000569575 PAHP00439 452 aa19.52■□□□□ 0.72
RAB40C-212ENST00000569575 DUSP1P28562 367 aa19.52■□□□□ 0.72
RAB40C-212ENST00000569575 FOXB2Q5VYV0 432 aa19.52■□□□□ 0.72
RAB40C-212ENST00000569575 LYPD2Q6UXB3 125 aa19.52■□□□□ 0.72
RAB40C-212ENST00000569575 ZNF841Q6ZN19 808 aa19.52■□□□□ 0.72
RAB40C-212ENST00000569575 SSBP3Q9BWW4 388 aaPredicted RBP19.52■□□□□ 0.72
RAB40C-212ENST00000569575 ATG5Q9H1Y0 275 aa19.52■□□□□ 0.72
RAB40C-212ENST00000569575 RABL2AQ9UBK7 228 aaPredicted RBP19.52■□□□□ 0.72
RAB40C-212ENST00000569575 RABL2BQ9UNT1 228 aa19.52■□□□□ 0.72
RAB40C-212ENST00000569575 TRBV23-1A0A0A0MS06 115 aa19.51■□□□□ 0.71
RAB40C-212ENST00000569575 PPIAL4CA0A0B4J2A2 164 aa19.51■□□□□ 0.71
RAB40C-212ENST00000569575 DVL1O14640 695 aa19.51■□□□□ 0.71
RAB40C-212ENST00000569575 GABRR1P24046 479 aa19.51■□□□□ 0.71
RAB40C-212ENST00000569575 BLVRBP30043 206 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-212ENST00000569575 GNB2P62879 340 aa19.51■□□□□ 0.71
RAB40C-212ENST00000569575 HOXA4Q00056 320 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-212ENST00000569575 WDR25Q64LD2 544 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-212ENST00000569575 SAMD12Q8N8I0 201 aa19.51■□□□□ 0.71
RAB40C-212ENST00000569575 ASCC1Q8N9N2 400 aaKnown RBP19.51■□□□□ 0.71
RAB40C-212ENST00000569575 OR10R2Q8NGX6 335 aa19.51■□□□□ 0.71
RAB40C-212ENST00000569575 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms