RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ELP2Q6IA86 826 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 Q6YL49 198 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 SLC25A28Q96A46 364 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 DUX5Q96PT3 197 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 DUSP21Q9H596 190 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 EXOSC4Q9NPD3 245 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 PAK1IP1Q9NWT1 392 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 CKLFQ9UBR5 152 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 RAB26Q9ULW5 256 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 GABRPO00591 440 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 PSPNO60542 156 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 OR2H2O95918 312 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 RNASE1P07998 156 aaKnown RBP11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 ZNF93P35789 620 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 TGFBR2P37173 567 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 VHLP40337 213 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 DLX1P56177 255 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 ACTG1P63261 375 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 PRB3Q04118 309 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 MEF2CQ06413 473 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 KLRD1Q13241 179 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 DOC2BQ14184 412 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 ZNF273Q14593 569 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 SPHARQ15513 63 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 GRK1Q15835 563 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 DDI2Q5TDH0 399 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 ASCL4Q6XD76 172 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 C11orf42Q8N5U0 333 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 TNFAIP8L1Q8WVP5 186 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 THRSPQ92748 146 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 ORAI1Q96D31 301 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 OR14A2Q96R54 314 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 CHST6Q9GZX3 395 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 FOXJ3Q9UPW0 622 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 SF3B6Q9Y3B4 125 aaKnown RBP11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 FAM96BQ9Y3D0 163 aa11.31□□□□□ -0.6
HERPUD1-218ENST00000569569 TRBV5-7A0A0A0MS05 114 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 A0A0U1RQK1 487 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 hADV38S2A0JD32 116 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 TMEM89A2RUT3 159 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 SIRPB1O00241 398 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 MGST3O14880 152 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 NPFFO15130 113 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 HOXA3O43365 443 aaPredicted RBP11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 RGS10O43665 173 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 ZNF44P15621 663 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 CCL3L1P16619 93 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 FSTP19883 344 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 CRHBPP24387 322 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 ERP29P30040 261 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 PTGFRP43088 359 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 ERVFRD-1P60508 538 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 SCN1BQ07699 218 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 EDDM3AQ14507 147 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 IRF3Q14653 427 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 RSU1Q15404 277 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 MED22Q15528 200 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 Q6P435 159 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 MS4A15Q8N5U1 240 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 CHST4Q8NCG5 386 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 Q8NFD4 153 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 OR4S1Q8NGB4 309 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 SGCDQ92629 289 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 GCDHQ92947 438 aaPredicted RBP11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 CNBD2Q96M20 576 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 OR5M11Q96RB7 305 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 S100A13Q99584 98 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 FAM192AQ9GZU8 254 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 HEXA-AS1Q9H8Q6 139 aa11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 LSM2Q9Y333 95 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-218ENST00000569569 DNHD1Q96M86 4753 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 A0A0G2JK05 382 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 A0A1W2PPK0 400 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 A0A1W2PRD5 423 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 A0A1W2PRF3 423 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 A0A1W2PRM7 423 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 MEIOCA2RUB1 952 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 FUOMA2VDF0 154 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 C17orf98A8MV24 154 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 DEGS1O15121 323 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 MELTFP08582 738 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 ZNF728P0DKX0 622 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 MAPK3P27361 379 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 OR3A1P47881 315 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 OR3A4PP47883 348 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 DLX6P56179 175 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 GPR50Q13585 617 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 RBM48Q5RL73 367 aaKnown RBP11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 HCP5Q6MZN7 132 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 C16orf87Q6PH81 154 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 TMEM86BQ8N661 226 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 OR51T1Q8NGJ9 327 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 DERL3Q96Q80 235 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 NR1H4Q96RI1 486 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 ZNF184Q99676 751 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 METTL9Q9H1A3 318 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 ING4Q9UNL4 249 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 POMT1Q9Y6A1 747 aa11.29□□□□□ -0.6
HERPUD1-218ENST00000569569 TRAV8-7A0A075B6U6 113 aa11.28□□□□□ -0.6
HERPUD1-218ENST00000569569 PIN1P1O15428 100 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms