RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 GYG2O15488 501 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 CACNG3O60359 315 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 PLEKHA8P1O95397 391 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 AGTP01019 485 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 SOD3P08294 240 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 TACSTD2P09758 323 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 SCGB1C2P0DMR2 95 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 PSKH1P11801 424 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 PEBP1P30086 187 aaKnown RBP0.19□□□□□ -2.38
CDH1-211ENST00000567320 HTR2BP41595 481 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 OR2B6P58173 313 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 IRF8Q02556 426 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 GPR176Q14439 515 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 TPRXLQ17RH7 258 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 TMEM53Q6P2H8 277 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 ERICH5Q6P6B1 374 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 FAM122BQ7Z309 247 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 COA5Q86WW8 74 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 APRG1Q8IVJ8 170 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 TRAM1L1Q8N609 369 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 OR10Z1Q8NGY1 313 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 OR6K3Q8NGY3 331 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 SCGB1C1Q8TD33 95 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 TWIST2Q8WVJ9 160 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 JSRP1Q96MG2 331 aaPredicted RBP0.19□□□□□ -2.38
CDH1-211ENST00000567320 C20orf144Q9BQM9 153 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 CD209Q9NNX6 404 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 ZC4H2Q9NQZ6 224 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 DOK5Q9P104 306 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 RBM12B-AS1Q9P1G2 102 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 PHLDA3Q9Y5J5 127 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 IGLV3-9A0A075B6K5 115 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 IGSF23A1L1A6 192 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 ZNF99A8MXY4 864 aaPredicted RBP0.18□□□□□ -2.38
CDH1-211ENST00000567320 SLC25A20O43772 301 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 RLN2P04090 185 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 TAC1P20366 129 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 GSTM3P21266 225 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 XKP51811 444 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 CTAG1AP78358 180 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 FAM229BQ4G0N7 80 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 TMEM215Q68D42 235 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 EPGNQ6UW88 154 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 SSX9Q7RTT3 188 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 GALNT10Q86SR1 603 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 LUZP2Q86TE4 346 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 FAM58AQ8N1B3 248 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 PQLC3Q8N755 202 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 OR4X2Q8NGF9 303 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 OR6K6Q8NGW6 343 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 QKIQ96PU8 341 aaKnown RBP eCLIP0.18□□□□□ -2.38
CDH1-211ENST00000567320 CHP1Q99653 195 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 DEFB129Q9H1M3 183 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 EXTL2Q9UBQ6 330 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 RPUSD1Q9UJJ7 312 aaKnown RBP0.18□□□□□ -2.38
CDH1-211ENST00000567320 TBC1D24Q9ULP9 559 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 C14orf166Q9Y224 244 aaKnown RBP0.18□□□□□ -2.38
CDH1-211ENST00000567320 LINC00588Q9Y4M8 146 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 TRPM3Q9HCF6 1732 aaPredicted RBP0.18□□□□□ -2.38
CDH1-211ENST00000567320 INSRP06213 1382 aa0.18□□□□□ -2.38
CDH1-211ENST00000567320 MDC1Q14676 2089 aaKnown RBP0.17□□□□□ -2.38
CDH1-211ENST00000567320 A0A1B0GVG6 124 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 FAM240AA0A1B0GVK7 77 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 A0A1W2PRD5 423 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 SLC5A10A0PJK1 596 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 H3BN98 237 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 CPLX1O14810 134 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 GYPCP04921 128 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 ALOX5APP20292 161 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 CNTFRP26992 372 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 HTR4Q13639 388 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 ATP6AP1LQ52LC2 224 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 CEP55Q53EZ4 464 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 C8orf31Q8N9H6 132 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 ZNRF2Q8NHG8 242 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 NT5CQ8TCD5 201 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 ISOC2Q96AB3 205 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 MCUR1Q96AQ8 359 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 CPB2Q96IY4 423 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 C9orf72Q96LT7 481 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 LINC01587Q99440 93 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 ELOVL6Q9H5J4 265 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 PLEKHA1Q9HB21 404 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 SDHAF3Q9NRP4 125 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 DDIT4Q9NX09 232 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 BTRCQ9Y297 605 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 NCKAP5O14513 1909 aa0.17□□□□□ -2.38
CDH1-211ENST00000567320 IGKV2-40A0A087WW87 121 aaPredicted RBP0.16□□□□□ -2.38
CDH1-211ENST00000567320 IGHV1-45A0A0A0MS14 117 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 ARRDC5A6NEK1 342 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 J3QQQ9 107 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 MPHOSPH10O00566 681 aaKnown RBP0.16□□□□□ -2.38
CDH1-211ENST00000567320 HSBP1O75506 76 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 IGKV2D-40P01614 121 aaPredicted RBP0.16□□□□□ -2.38
CDH1-211ENST00000567320 M6PRP20645 277 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 EVI2BP34910 448 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 HCCSP53701 268 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 CLDN6P56747 220 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 TAS2R39P59534 338 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 RPL26P61254 145 aaKnown RBP0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms