RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ZCCHC24Q8N2G6 241 aaKnown RBP2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 STPG2Q8N412 459 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 GATD1Q8NB37 220 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 ZNF485Q8NCK3 441 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 OR10G9Q8NGN4 311 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 OR4C13Q8NGP0 309 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 ENKURQ8TC29 256 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 ACTRT1Q8TDG2 376 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 CYGBQ8WWM9 190 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 PPCDCQ96CD2 204 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 BIRC8Q96P09 236 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 PHB2Q99623 299 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 DHRS9Q9BPW9 319 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 TMEM243Q9BU79 118 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 PECRQ9BY49 303 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 ULBP1Q9BZM6 244 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 GNB4Q9HAV0 340 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 HEBP1Q9NRV9 189 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 RBM22Q9NW64 420 aaKnown RBP eCLIP2.48□□□□□ -2.018e-10■■■■■ 33.4
HERPUD1-211ENST00000566550 KLK13Q9UKR3 277 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 C14orf166Q9Y224 244 aaKnown RBP2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 TP53TG1Q9Y2A0 90 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 ARL2BPQ9Y2Y0 163 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 NCOA3Q9Y6Q9 1424 aa2.48□□□□□ -2.01
HERPUD1-211ENST00000566550 C2orf16Q68DN1 1984 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 THSD7BQ9C0I4 1608 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 TRAV19A0A0A6YYK7 116 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 TRAV8-2A0A0B4J237 113 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 IGKV1-8A0A0C4DH67 115 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 TMEM238C9JI98 176 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 I3L4J1 428 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 KCNK1O00180 336 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 PEX7O00628 323 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 TAAR5O14804 337 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 ZG16O60844 167 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 SPAG7O75391 227 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 SUPT3HO75486 399 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 SUPT7LO94864 414 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 CTSLP07711 333 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 OR4E1P0C645 316 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 HIST1H1EP10412 219 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 AKR1C4P17516 323 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 TAC1P20366 129 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 CXCR1P25024 350 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 MSNP26038 577 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 APLNRP35414 380 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 LGALS7P47929 136 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 HSPA13P48723 471 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 PPOXP50336 477 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 IDH3GP51553 393 aaPredicted RBP2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 RANP62826 216 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 RPL23P62829 140 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 FAM3AP98173 230 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 IFITM3Q01628 133 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 ADIGQ0VDE8 80 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 CLEC12BQ2HXU8 276 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 HIST2H3PS2Q5TEC6 136 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 SAXO2Q658L1 398 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 OPN5Q6U736 354 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 Q6ZSR6 202 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 FAM183BPQ6ZVS7 135 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 H2AFVQ71UI9 128 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 CALHM1Q8IU99 346 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 GID4Q8IVV7 300 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 KLHL30-AS1Q8NEE0 82 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 OR51D1Q8NGF3 324 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 OR4P4Q8NGL7 312 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 RHOXF1Q8NHV9 184 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 PIFOQ8TCI5 191 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 C7orf33Q8WU49 177 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 GHSRQ92847 366 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 LRRC58Q96CX6 371 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 SMIM8Q96KF7 97 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 PRAP1Q96NZ9 151 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 SOSTQ9BQB4 213 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC22A4Q9H015 551 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 POMKQ9H5K3 350 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 PAQR5Q9NXK6 330 aaPredicted RBP2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 PSG8Q9UQ74 426 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 COL6A3P12111 3177 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 BRCA1P38398 1863 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 ABCC11Q96J66 1382 aa2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 VIRMAQ69YN4 1812 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-211ENST00000566550 PREX2Q70Z35 1606 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 ARHGAP35Q9NRY4 1499 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 TMEM131Q92545 1883 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 NWD2Q9ULI1 1742 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 MAST1Q9Y2H9 1570 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 PLCH2O75038 1416 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 IFITM10A6NMD0 228 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 EVPLLA8MZ36 301 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 H3BQV1 296 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 M0R1X1 148 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 PSMD12O00232 456 aaPredicted RBP2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 MFNGO00587 321 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 PHYHO14832 338 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 ZNF354AO60765 605 aaPredicted RBP2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 FOXH1O75593 365 aa2.46□□□□□ -2.02
HERPUD1-211ENST00000566550 SERPINB7O75635 380 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms