RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 TTTY10Q9BZA0 68 aa10.17□□□□□ -0.78
RNF40-208ENST00000565995 SEBOXQ9HB31 216 aaPredicted RBP10.17□□□□□ -0.78
RNF40-208ENST00000565995 ADGRL4Q9HBW9 690 aa10.17□□□□□ -0.78
RNF40-208ENST00000565995 FAM206AQ9NX38 181 aa10.17□□□□□ -0.78
RNF40-208ENST00000565995 ZMAT5Q9UDW3 170 aaKnown RBP10.17□□□□□ -0.78
RNF40-208ENST00000565995 PSORS1C1Q9UIG5 152 aa10.17□□□□□ -0.78
RNF40-208ENST00000565995 U3KQK5 164 aa10.17□□□□□ -0.78
RNF40-208ENST00000565995 SACSQ9NZJ4 4579 aa10.17□□□□□ -0.78
RNF40-208ENST00000565995 RYR2Q92736 4967 aa10.17□□□□□ -0.78
RNF40-208ENST00000565995 CSMD3Q7Z407 3707 aa10.17□□□□□ -0.78
RNF40-208ENST00000565995 RGS10O43665 173 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 ZFPL1O95159 310 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 AMY1AP04745 511 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 AMY2AP04746 511 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 RPSAP08865 295 aaKnown RBP10.16□□□□□ -0.78
RNF40-208ENST00000565995 PIPP12273 146 aaPredicted RBP10.16□□□□□ -0.78
RNF40-208ENST00000565995 MYL12AP19105 171 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 CRHBPP24387 322 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 GABARAPL2P60520 117 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 ST3GAL4Q11206 333 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 TMEM42Q69YG0 159 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 TCF23Q7RTU1 214 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 OR52I1Q8NGK6 324 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 THEM6Q8WUY1 208 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 GGHQ92820 318 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 AKR1E2Q96JD6 320 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 NR1H4Q96RI1 486 aaPredicted RBP10.16□□□□□ -0.78
RNF40-208ENST00000565995 PLCXD1Q9NUJ7 323 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 CHCHD3Q9NX63 227 aaKnown RBP10.16□□□□□ -0.78
RNF40-208ENST00000565995 CNOT2Q9NZN8 540 aaKnown RBP10.16□□□□□ -0.78
RNF40-208ENST00000565995 HHLA2Q9UM44 414 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 POLDIP2Q9Y2S7 368 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 LSM4Q9Y4Z0 139 aaKnown RBP10.16□□□□□ -0.78
RNF40-208ENST00000565995 HILPDAQ9Y5L2 63 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 SNX5Q9Y5X3 404 aa10.16□□□□□ -0.78
RNF40-208ENST00000565995 HUWE1Q7Z6Z7 4374 aaKnown RBP10.15□□□□□ -0.78
RNF40-208ENST00000565995 IGHV2-26A0A0B4J1V2 119 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 DAPL1A0PJW8 107 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 PQLC2LA1A4F0 135 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 ZNF670-ZNF695F2Z2N8 137 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 MYL12BO14950 172 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 NXPH2O95156 264 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 NRASP01111 189 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 CHRM2P08172 466 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 ALOX5APP20292 161 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 SLC6A1P30531 599 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 HAAOP46952 286 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 THBS3P49746 956 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 ACTA2P62736 377 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 ACTG2P63267 376 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 KCTD21Q4G0X4 260 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 DMRTC1Q5HYR2 192 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 C10orf99Q6UWK7 81 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 Q6ZSR3 168 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 RNF144BQ7Z419 303 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 TMEM80Q96HE8 168 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 ZNF714Q96N38 554 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 RBM14Q96PK6 669 aaKnown RBP10.15□□□□□ -0.78
RNF40-208ENST00000565995 YTHDF1Q9BYJ9 559 aaKnown RBP10.15□□□□□ -0.78
RNF40-208ENST00000565995 PAK1IP1Q9NWT1 392 aaPredicted RBP10.15□□□□□ -0.78
RNF40-208ENST00000565995 ENPP5Q9UJA9 477 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 LAMP5Q9UJQ1 280 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 PIGLQ9Y2B2 252 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 KLHDC2Q9Y2U9 406 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 SESN1Q9Y6P5 492 aa10.15□□□□□ -0.78
RNF40-208ENST00000565995 EPPK1P58107 5090 aaKnown RBP10.14□□□□□ -0.79
RNF40-208ENST00000565995 TMEM269A0A1B0GVZ9 245 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 OR2F2O95006 317 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 CDK1P06493 297 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 LPLP06858 475 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 IL24Q13007 206 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 DYNC1I2Q13409 638 aaKnown RBP10.14□□□□□ -0.79
RNF40-208ENST00000565995 NKAPLQ5M9Q1 402 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 ZNF684Q5T5D7 378 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 PLCXD3Q63HM9 321 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 OR8H2Q8N162 312 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 OR51D1Q8NGF3 324 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 OR4P4Q8NGL7 312 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 MRPL48Q96GC5 212 aaKnown RBP10.14□□□□□ -0.79
RNF40-208ENST00000565995 CLEC7AQ9BXN2 247 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 PKIBQ9C010 78 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 YIPF3Q9GZM5 350 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 TMEM133Q9H2Q1 129 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 GPR84Q9NQS5 396 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 OR14J1Q9UGF5 321 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 IKZF2Q9UKS7 526 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 DIMT1Q9UNQ2 313 aaKnown RBP10.14□□□□□ -0.79
RNF40-208ENST00000565995 SLC22A13Q9Y226 551 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 EXOGQ9Y2C4 368 aaKnown RBP10.14□□□□□ -0.79
RNF40-208ENST00000565995 EXOSC1Q9Y3B2 195 aaKnown RBP10.14□□□□□ -0.79
RNF40-208ENST00000565995 LINC00312Q9Y6C7 94 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 TMEM14AQ9Y6G1 99 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 DNAH1Q9P2D7 4330 aa10.14□□□□□ -0.79
RNF40-208ENST00000565995 MAGEA13PA6NCF6 341 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 RAMP3O60896 148 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 DHRS3O75911 302 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 MT-ND2P03891 347 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 OR2T7P0C7T2 308 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 LMO1P25800 156 aa10.13□□□□□ -0.79
RNF40-208ENST00000565995 DCKP27707 260 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms