RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 P2RX3P56373 397 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 DSCR9P59020 149 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 TAS2R20P59543 309 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 MADCAM1Q13477 382 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 RBMS2Q15434 407 aaKnown RBP10.63□□□□□ -0.71
SF3B3-206ENST00000565990 DMRTC1Q5HYR2 192 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 ZNF573Q86YE8 665 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 TGIF2LYQ8IUE0 185 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 KRTAP1-3Q8IUG1 177 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 SCCPDHQ8NBX0 429 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 ZNF680Q8NEM1 530 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 OR52I2Q8NH67 350 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 PTX4Q96A99 478 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 ORAI1Q96D31 301 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 PERPQ96FX8 193 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 OR2A7Q96R45 310 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 ALX4Q9H161 411 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-206ENST00000565990 CHODLQ9H9P2 273 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 SCPEP1Q9HB40 452 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 MED9Q9NWA0 146 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 TAS2R4Q9NYW5 299 aa10.63□□□□□ -0.71
SF3B3-206ENST00000565990 MRPS7Q9Y2R9 242 aaKnown RBP10.63□□□□□ -0.71
SF3B3-206ENST00000565990 PRRC2AP48634 2157 aaKnown RBP10.63□□□□□ -0.71
SF3B3-206ENST00000565990 VPS13CQ709C8 3753 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 TRAV8-7A0A075B6U6 113 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 LRP5LA4QPB2 252 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 CYSRT1A8MQ03 144 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 HMSDA8MTL9 139 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 LYNX1G3V0Z9 82 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 SLC17A2O00624 439 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 TPD52L2O43399 206 aaKnown RBP10.62□□□□□ -0.71
SF3B3-206ENST00000565990 RBBP9O75884 186 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 LYNX1P0DP58 116 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 MPZP25189 248 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 ARPC4P59998 168 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 ACTBP60709 375 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 ACTG1P63261 375 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 CNN3Q15417 329 aaKnown RBP10.62□□□□□ -0.71
SF3B3-206ENST00000565990 HFEQ30201 348 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 PRAMEF6Q5VXH4 476 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 SHEQ5VZ18 495 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 ZNF626Q68DY1 528 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 MOGAT3Q86VF5 341 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 CCDC28AQ8IWP9 274 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 OR8H1Q8NGG4 311 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 OR51A2Q8NGJ7 313 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 OR13C9Q8NGT0 318 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 AQP3Q92482 292 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 CCL17Q92583 94 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 PKIBQ9C010 78 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 FN3KRPQ9HA64 309 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 CKLFQ9UBR5 152 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 UBQLN2Q9UHD9 624 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 YLPM1P49750 1951 aaKnown RBP10.62□□□□□ -0.71
SF3B3-206ENST00000565990 CSMD1Q96PZ7 3565 aa10.62□□□□□ -0.71
SF3B3-206ENST00000565990 FAM230AA0A1W2PPH8 454 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 UBE2QL1A1L167 161 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 VWC2LB2RUY7 222 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 TMEM178BH3BS89 294 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 NDUFS8O00217 210 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 CDIPTO14735 213 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 AKR7A2O43488 359 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 CDC14BO60729 498 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 SCGNO76038 276 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 MT-ND4P03905 459 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 ADRA2CP18825 462 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 CDK2P24941 298 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 BDKRB2P30411 391 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 CCR6P51684 374 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 ATP1B3P54709 279 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 MTCP1P56278 107 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 RAB14P61106 215 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 IL24Q13007 206 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 BAMBIQ13145 260 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 ZMYND11Q15326 602 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 KISS1Q15726 138 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 HES5Q5TA89 166 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 GLT8D1Q68CQ7 371 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 FAM166AQ6J272 317 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 WDR82Q6UXN9 313 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 ASCL4Q6XD76 172 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 LHFPL2Q6ZUX7 228 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 RNF144BQ7Z419 303 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 ANGPTL5Q86XS5 388 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 CALHM1Q8IU99 346 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 ZNF525Q8N782 197 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 OR52N4Q8NGI2 321 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 OR10Z1Q8NGY1 313 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 C10orf105Q8TEF2 133 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 FOXRED1Q96CU9 486 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-206ENST00000565990 BORCS8Q96FH0 119 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 AUNIPQ9H7T9 357 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 HEXA-AS1Q9H8Q6 139 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 TMEM106BQ9NUM4 274 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 C1orf123Q9NWV4 160 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 TREM2Q9NZC2 230 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 SLC23A1Q9UHI7 598 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 KIF25Q9UIL4 384 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 MAB21L2Q9Y586 359 aa10.61□□□□□ -0.71
SF3B3-206ENST00000565990 IGHV3-64DA0A0J9YX35 117 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 862.5 ms