RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 RCC2Q9P258 522 aaKnown RBP15.78■□□□□ 0.12
COMMD4-213ENST00000565834 MTFP1Q9UDX5 166 aa15.78■□□□□ 0.12
COMMD4-213ENST00000565834 GLS2Q9UI32 602 aa15.78■□□□□ 0.12
COMMD4-213ENST00000565834 DSCAMO60469 2012 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 SH2D1BO14796 132 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 DEGS1O15121 323 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 CA11O75493 328 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 KNG1P01042 644 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 COX6B1P14854 86 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 ZNF44P15621 663 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 RBMXP38159 391 aaKnown RBP15.77■□□□□ 0.12
COMMD4-213ENST00000565834 Q6P435 159 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 FAM90A1Q86YD7 464 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 TOMM5Q8N4H5 51 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 TRAF4Q9BUZ4 470 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-213ENST00000565834 DNAJB11Q9UBS4 358 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 OR14J1Q9UGF5 321 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 LAMP3Q9UQV4 416 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 PLEKHA6Q9Y2H5 1048 aa15.77■□□□□ 0.12
COMMD4-213ENST00000565834 UTP20O75691 2785 aaKnown RBP15.77■□□□□ 0.12
COMMD4-213ENST00000565834 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-213ENST00000565834 HAND1O96004 215 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 CYB5R3P00387 301 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-213ENST00000565834 ACTBP60709 375 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 ACTG1P63261 375 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 TLE4Q04727 773 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 SSBP1Q04837 148 aaKnown RBP15.76■□□□□ 0.11
COMMD4-213ENST00000565834 BRICD5Q6PL45 260 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 POC5Q8NA72 575 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 SETD6Q8TBK2 473 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 RAB1BQ9H0U4 201 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 TBC1D24Q9ULP9 559 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 UBE2QL1A1L167 161 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 SSX5O60225 188 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 OR2H2O95918 312 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 HPXP02790 462 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 GSTT2BP0CG30 244 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 MRPS15P82914 257 aaKnown RBP15.76■□□□□ 0.11
COMMD4-213ENST00000565834 ASAH1Q13510 395 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 RGS21Q2M5E4 152 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 SP5Q6BEB4 398 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-213ENST00000565834 TGIF2LYQ8IUE0 185 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 SUMF2Q8NBJ7 301 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 CACNG6Q9BXT2 260 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 NLKQ9UBE8 527 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 AK3Q9UIJ7 227 aa15.76■□□□□ 0.11
COMMD4-213ENST00000565834 TRAV24A0A0B4J272 114 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 IGHV1-69-2A0A0G2JMI3 117 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 MCRIP1C9JLW8 97 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 IFNL4K9M1U5 179 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 SIRPB1O00241 398 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 ECDO95905 644 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-213ENST00000565834 CD80P33681 288 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 AP3S2P59780 193 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 DCDC5Q6ZRR9 648 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 C1orf87Q8N0U7 546 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 NEK7Q8TDX7 302 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 RDH5Q92781 318 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 COX4I2Q96KJ9 171 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 CLEC4MQ9H2X3 399 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-213ENST00000565834 IFT46Q9NQC8 304 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 TAS2R8Q9NYW2 309 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 WIPI2Q9Y4P8 454 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 CACNG2Q9Y698 323 aa15.75■□□□□ 0.11
COMMD4-213ENST00000565834 DCHS2Q6V1P9 2916 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 RFPL4AA6NLU0 287 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 RFPL4AL1F8VTS6 287 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 HSPB6O14558 160 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 GLAP06280 429 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 CSF1P09603 554 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 RCVRNP35243 200 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 CBX5P45973 191 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 CEBPDP49716 269 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-213ENST00000565834 KLF9Q13886 244 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-213ENST00000565834 CCL17Q92583 94 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 DYRK2Q92630 601 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 CMSS1Q9BQ75 279 aaKnown RBP15.74■□□□□ 0.11
COMMD4-213ENST00000565834 DPCDQ9BVM2 203 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-213ENST00000565834 TMEM106BQ9NUM4 274 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 DCAF16Q9NXF7 216 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 TENM4Q6N022 2769 aa15.74■□□□□ 0.11
COMMD4-213ENST00000565834 IGHV3OR15-7A0A075B7D8 119 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 ANKRD20A5PA0PJZ0 165 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 OR2AT4A6NND4 320 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 SLC33A1O00400 549 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-213ENST00000565834 PLA2G10O15496 165 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 FCER2P06734 321 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 PSG2P11465 335 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 RBM39Q14498 530 aaKnown RBP15.73■□□□□ 0.11
COMMD4-213ENST00000565834 PAN3Q58A45 887 aaKnown RBP15.73■□□□□ 0.11
COMMD4-213ENST00000565834 FAM201AQ5SY85 155 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 SFRP4Q6FHJ7 346 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-213ENST00000565834 OR5T2Q8NGG2 359 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 OCSTAMPQ9BR26 566 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 USP9YO00507 2555 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-213ENST00000565834 HELZ2Q9BYK8 2649 aaKnown RBP15.73■□□□□ 0.11
COMMD4-213ENST00000565834 TMEM178BH3BS89 294 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 DYRK1AQ13627 763 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 MICBQ29980 383 aa15.73■□□□□ 0.11
COMMD4-213ENST00000565834 BPIFB2Q8N4F0 458 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms