RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 BCL3P20749 454 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 IER3P46695 156 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 NPBWR2P48146 333 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 ERVK11-1P61568 191 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 RELBQ01201 579 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 NCR3LG1Q68D85 454 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 TMEM200BQ69YZ2 307 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 ASPHD2Q6ICH7 369 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 METAP1DQ6UB28 335 aaPredicted RBP11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 LHFPL2Q6ZUX7 228 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 RNF144BQ7Z419 303 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 LDLRAD3Q86YD5 345 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 TMEM86BQ8N661 226 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 OR5D18Q8NGL1 313 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 OR13C5Q8NGS8 318 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 C17orf50Q8WW18 174 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 OPALINQ96PE5 141 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 NEK6Q9HC98 313 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 RBFOX1Q9NWB1 397 aaKnown RBP11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 ZNRD1Q9P1U0 126 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 POMT1Q9Y6A1 747 aa11.14□□□□□ -0.63
VPS9D1-204ENST00000565023 PNMA8CA0A1B0GUJ8 204 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 A0A1W2PPH5 198 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 SULT1B1O43704 296 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 CHRM2P08172 466 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 PRKACAP17612 351 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 GABRR1P24046 479 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 BMXP51813 675 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 UBE2E1P51965 193 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 GABARAPL2P60520 117 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 SRSF4Q08170 494 aaKnown RBP11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 MED22Q15528 200 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 LY6EQ16553 131 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 TAF9Q16594 264 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 Q499Y3 187 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 HCP5Q6MZN7 132 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 CRIP3Q6Q6R5 217 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 SHISA2Q6UWI4 295 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 GDPD3Q7L5L3 318 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 TPRX1Q8N7U7 411 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 OR5D13Q8NGL4 314 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 OR4F5Q8NH21 305 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 DMRTB1Q96MA1 342 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 YTHDF1Q9BYJ9 559 aaKnown RBP11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 CCDC90BQ9GZT6 254 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 CHST6Q9GZX3 395 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 DPAGT1Q9H3H5 408 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 BEX1Q9HBH7 125 aa11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 SF3B6Q9Y3B4 125 aaKnown RBP11.13□□□□□ -0.63
VPS9D1-204ENST00000565023 TMEM82A0PJX8 343 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 K7N7A8 449 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 SIRPB1O00241 398 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 MRPS14O60783 128 aaKnown RBP11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 GPX5O75715 221 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 HAND1O96004 215 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 HCKP08631 526 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 RAB3AP20336 220 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 PDZK1IP1Q13113 114 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 GPR50Q13585 617 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 TBCEQ15813 527 aaPredicted RBP11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 PLA1AQ53H76 456 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 C1orf122Q6ZSJ8 110 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 FAM58AQ8N1B3 248 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 OR51A2Q8NGJ7 313 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 SGMS2Q8NHU3 365 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 DYRK2Q92630 601 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 ISYNA1Q9NPH2 558 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 GSTK1Q9Y2Q3 226 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 MGAM2Q2M2H8 2515 aa11.12□□□□□ -0.63
VPS9D1-204ENST00000565023 TRBV5-7A0A0A0MS05 114 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 ALDOBP05062 364 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 IGFBP3P17936 291 aaPredicted RBP11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 MAP2K4P45985 399 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 SCN1BQ07699 218 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 MLLT11Q13015 90 aaPredicted RBP11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 TPBGQ13641 420 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 KISS1Q15726 138 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 GRK1Q15835 563 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 OLFML2AQ68BL7 652 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 DHRS7BQ6IAN0 325 aaPredicted RBP11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 C17orf107Q6ZR85 190 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 MS4A15Q8N5U1 240 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 OR52N4Q8NGI2 321 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 OR14A2Q96R54 314 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 FAM234AQ9H0X4 552 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 HEXA-AS1Q9H8Q6 139 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 ING3Q9NXR8 418 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 KIAA2026Q5HYC2 2103 aa11.11□□□□□ -0.63
VPS9D1-204ENST00000565023 IGKV1-12A0A0C4DH73 117 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 hCG_1809904A0A1W2PP81 198 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 A0A1W2PPE2 198 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 A0A1W2PR64 198 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 A0A1W2PRV1 198 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 POM121CA8CG34 1229 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 H3BUX3 64 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 ZNF737O75373 536 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 IGKV1D-12P01611 117 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 FSTP19883 344 aa11.1□□□□□ -0.63
VPS9D1-204ENST00000565023 LGALS4P56470 323 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms