RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 B2MP61769 119 aa2.96□□□□□ -1.93
CHD9-213ENST00000564845 LRRC37A5PQ49AS3 106 aa2.96□□□□□ -1.93
CHD9-213ENST00000564845 SLC35F2Q8IXU6 374 aa2.96□□□□□ -1.93
CHD9-213ENST00000564845 C1orf162Q8NEQ5 155 aaPredicted RBP2.96□□□□□ -1.93
CHD9-213ENST00000564845 TMEM239Q8WW34 195 aa2.96□□□□□ -1.93
CHD9-213ENST00000564845 MIB2Q96AX9 1013 aa2.96□□□□□ -1.93
CHD9-213ENST00000564845 K7EMI3 77 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 SUSD5O60279 629 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 TRAPPC6AO75865 159 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 NQO2P16083 231 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 DPP4P27487 766 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 GAS1P54826 345 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 TMEM255AQ5JRV8 349 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 VASNQ6EMK4 673 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 TRAPPC6BQ86SZ2 158 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 OR13F1Q8NGS4 319 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 COMMD5Q9GZQ3 224 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 OR52A1Q9UKL2 312 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 SCRG1O75711 98 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 ZNF728P0DKX0 622 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 RPS4XP62701 263 aaKnown RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 ST3GAL2Q16842 350 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 IGSF11Q5DX21 431 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 ZNF385CQ66K41 422 aaPredicted RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 WNT2BQ93097 391 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 SLC25A46Q96AG3 418 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 SLC25A33Q9BSK2 321 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 TAAR3PQ9P1P4 343 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 WASHC3Q9Y3C0 194 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 V9GY05 133 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 A0A1B0GWA3 101 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 LRRC3CA6NJW4 275 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 H7C1H1 209 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 AIPO00170 330 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 ARL3P36405 182 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 ZNF136P52737 540 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 FOXG1P55316 489 aaPredicted RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 NANOS3P60323 173 aaKnown RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 RAC3P60763 192 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 EXOSC2Q13868 293 aaKnown RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 TMPRSS12Q86WS5 348 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 CALHM1Q8IU99 346 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 OR13G1Q8NGZ3 307 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 SLC35E1Q96K37 410 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 ACTR3CQ9C0K3 210 aaPredicted RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 CTDSP1Q9GZU7 261 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 CACNG5Q9UF02 275 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 LOC100289279A0A1B0GTE1 492 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 DCDC2BA2VCK2 349 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 CD300LBA8K4G0 201 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 TUSC2O75896 110 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 CRYZL1O95825 349 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 TFP02787 698 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 RFPL3SP0C7P2 107 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 MYOD1P15172 320 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 SLC6A1P30531 599 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 RPS20P60866 119 aaKnown RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 TAF9Q16594 264 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 LEMD1Q68G75 181 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 GTF2H5Q6ZYL4 71 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 OR8H3Q8N146 312 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 OR5T1Q8NG75 326 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 FAM173AQ9BQD7 235 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 VN1R1Q9GZP7 353 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 PSORS1C1Q9UIG5 152 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 RTTNQ86VV8 2226 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 CACNA1CQ13936 2221 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 A0A0U1RQV5 110 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 MEIOCA2RUB1 952 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 ZNF14P17017 642 aaPredicted RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 PI3P19957 117 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 ZNF117Q03924 483 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 ALKBH1Q13686 389 aaKnown RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 HAGHQ16775 308 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.96□□□□□ -1.94
CHD9-213ENST00000564845 VMA21Q3ZAQ7 101 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 OR4A16Q8NH70 328 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 VN1R17PQ8TDU5 208 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 RNF166Q96A37 237 aaPredicted RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 ZNF426Q9BUY5 554 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 DDA1Q9BW61 102 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 ZNF160Q9HCG1 818 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 SIRT7Q9NRC8 400 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 SLC5A6Q9Y289 635 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 KCNMB2Q9Y691 235 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 TRAV30A0A087WSZ9 112 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 HIST1H1EP10412 219 aaKnown RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 TNFSF8P32971 234 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 IDH3GP51553 393 aaPredicted RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 FAM3AP98173 230 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 MICBQ29980 383 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 MRPL54Q6P161 138 aaKnown RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 FAM122BQ7Z309 247 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 RNF152Q8N8N0 203 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 RELL2Q8NC24 303 aaPredicted RBP2.96□□□□□ -1.94
CHD9-213ENST00000564845 FAM71CQ8NEG0 241 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 OR1N1Q8NGS0 311 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 OR10J6PQ8NGY7 276 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 RAB1CQ92928 201 aa2.96□□□□□ -1.94
CHD9-213ENST00000564845 TAAR6Q96RI8 345 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms