RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 TRAM1Q15629 374 aa14.21□□□□□ -0.13
USB1-209ENST00000564387 ZNF367Q7RTV3 350 aa14.21□□□□□ -0.13
USB1-209ENST00000564387 ASCC1Q8N9N2 400 aaKnown RBP14.21□□□□□ -0.13
USB1-209ENST00000564387 CHST4Q8NCG5 386 aa14.21□□□□□ -0.13
USB1-209ENST00000564387 GPER1Q99527 375 aa14.21□□□□□ -0.13
USB1-209ENST00000564387 TMED9Q9BVK6 235 aa14.21□□□□□ -0.13
USB1-209ENST00000564387 PPIL3Q9H2H8 161 aaKnown RBP14.21□□□□□ -0.13
USB1-209ENST00000564387 COL6A5A8TX70 2615 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 DSCAML1Q8TD84 2053 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 A0A0G2JK05 382 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 MEGF11A6BM72 1044 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 CSN2P05814 226 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 PRTN3P24158 256 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 ERP29P30040 261 aaKnown RBP14.2□□□□□ -0.14
USB1-209ENST00000564387 OR3A1P47881 315 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 CAPZA1P52907 286 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 DLX6P56179 175 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 MEF2CQ06413 473 aaPredicted RBP14.2□□□□□ -0.14
USB1-209ENST00000564387 IL13RA2Q14627 380 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 FAM27D1Q5T7N8 215 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 UBE2UQ5VVX9 321 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 VMO1Q7Z5L0 202 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 LRRTM1Q86UE6 522 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 SPARTQ8N0X7 666 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 BCL6BQ8N143 479 aaPredicted RBP14.2□□□□□ -0.14
USB1-209ENST00000564387 NKAIN3Q8N8D7 197 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 ZNF418Q8TF45 676 aaPredicted RBP14.2□□□□□ -0.14
USB1-209ENST00000564387 C1orf147Q96MC9 270 aaPredicted RBP14.2□□□□□ -0.14
USB1-209ENST00000564387 SLC6A7Q99884 636 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 SUCNR1Q9BXA5 334 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 OCEL1Q9H607 264 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 IFT22Q9H7X7 185 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 METTL8Q9H825 291 aaKnown RBP14.2□□□□□ -0.14
USB1-209ENST00000564387 EXOSC4Q9NPD3 245 aaKnown RBP14.2□□□□□ -0.14
USB1-209ENST00000564387 ONECUT1Q9UBC0 465 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 GSTK1Q9Y2Q3 226 aa14.2□□□□□ -0.14
USB1-209ENST00000564387 IGHV1-69DA0A0B4J2H0 117 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 A0A1W2PQ09 198 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 MGST3O14880 152 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 ZNF780AO75290 641 aaPredicted RBP14.19□□□□□ -0.14
USB1-209ENST00000564387 CDRT1O95170 752 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 IGHV1-69P01742 117 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 HSMCR30P0CW71 290 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 RSU1Q15404 277 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 GPR157Q5UAW9 335 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 TCF23Q7RTU1 214 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 BPIFB2Q8N4F0 458 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 SVOPQ8N4V2 548 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 OR4S1Q8NGB4 309 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 ZNF48Q96MX3 618 aaPredicted RBP14.19□□□□□ -0.14
USB1-209ENST00000564387 MDFIQ99750 246 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 NKX3-1Q99801 234 aaPredicted RBP14.19□□□□□ -0.14
USB1-209ENST00000564387 UQCC2Q9BRT2 126 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 MS4A7Q9GZW8 240 aaPredicted RBP14.19□□□□□ -0.14
USB1-209ENST00000564387 METTL9Q9H1A3 318 aa14.19□□□□□ -0.14
USB1-209ENST00000564387 C17orf98A8MV24 154 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 SLC33A1O00400 549 aaPredicted RBP14.18□□□□□ -0.14
USB1-209ENST00000564387 VENTXO95231 258 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 RBP4P02753 201 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 MAS1P04201 325 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 SRMP19623 302 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 GABRA5P31644 462 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 RPS25P62851 125 aaKnown RBP14.18□□□□□ -0.14
USB1-209ENST00000564387 PAX5Q02548 391 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 ZNF273Q14593 569 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 SSX1Q16384 188 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 CD200R1LQ6Q8B3 271 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 GDPD3Q7L5L3 318 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 CEACAM19Q7Z692 300 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 OR4M1Q8NGD0 313 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 PPP1R35Q8TAP8 253 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 ZFAND2BQ8WV99 257 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 C22orf15Q8WYQ4 148 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 LHX4Q969G2 390 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 TMEM203Q969S6 136 aa14.18□□□□□ -0.14
USB1-209ENST00000564387 IGHV3OR16-10A0A075B7F0 116 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 A0A1W2PPH5 198 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 RNASEK-C17orf49H0YIS7 233 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 GABRR1P24046 479 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 SNU13P55769 128 aaKnown RBP14.17□□□□□ -0.14
USB1-209ENST00000564387 BLMHQ13867 455 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 GPR176Q14439 515 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 GRK1Q15835 563 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 KCTD21Q4G0X4 260 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 C1orf100Q5SVJ3 147 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 HCP5Q6MZN7 132 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 ZNF773Q6PK81 442 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 BRD3OSQ6XYD6 125 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 FAM185AQ8N0U4 392 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 ZDHHC22Q8N966 263 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 OR4D6Q8NGJ1 314 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 OR10K1Q8NGX5 313 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 MRPS24Q96EL2 167 aaKnown RBP14.17□□□□□ -0.14
USB1-209ENST00000564387 JMJD8Q96S16 334 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 FAM192AQ9GZU8 254 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 CHST6Q9GZX3 395 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 NCOR1P1Q9H4R4 102 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 ESM1Q9NQ30 184 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 PCDHB16Q9NRJ7 776 aa14.17□□□□□ -0.14
USB1-209ENST00000564387 NDUFB11Q9NX14 153 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms