RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 LRRN1Q6UXK5 716 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 GDPD3Q7L5L3 318 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 SLC51BQ86UW2 128 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 CPNE9Q8IYJ1 553 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 OR10G8Q8NGN5 311 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 OR11L1Q8NGX0 322 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 OR2V1Q8NHB1 315 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 CD200R1Q8TD46 325 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 EEF1AKMT1Q8WVE0 214 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 TCEAL3Q969E4 200 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 CNRIP1Q96F85 164 aaPredicted RBP4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 ATXN7L3BQ96GX2 97 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 ST6GAL2Q96JF0 529 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 ZNF778Q96MU6 729 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 NOL4LQ96MY1 436 aaPredicted RBP4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 KCNJ16Q9NPI9 418 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 RRAGDQ9NQL2 400 aaPredicted RBP4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 CIDEBQ9UHD4 219 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 BTRCQ9Y297 605 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 ARL2BPQ9Y2Y0 163 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 OR51B2Q9Y5P1 312 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 ZNF318Q5VUA4 2279 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 GON4LQ3T8J9 2241 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 CEP192Q8TEP8 1941 aa4.18□□□□□ -1.74
VPS35P1-201ENST00000563400 FANCMQ8IYD8 2048 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 CACNA1HO95180 2353 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 KMT2EQ8IZD2 1858 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 IGHV3-20A0A0C4DH32 117 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 OR51F1A6NGY5 319 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 ANKRD65E5RJM6 399 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 AZIN1O14977 448 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 FADS1O60427 444 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 ENTPD6O75354 484 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 SUPT7LO94864 414 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 GLSO94925 669 aaPredicted RBP4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 TNFSF15O95150 251 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 CD5P06127 495 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 UQCRHP07919 91 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 C1GALT1C1LP0DN25 315 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 THRAP10827 490 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 HSD17B1P14061 328 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 TIMP3P35625 211 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 NR4A2P43354 598 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 RND2P52198 227 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 DVL1P1P54792 670 aaPredicted RBP4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 DLX6P56179 175 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 TAS2R39P59534 338 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 RAB4BP61018 213 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 DCDP81605 110 aaKnown RBP4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 ACSBG2Q5FVE4 666 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 SLC18B1Q6NT16 456 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 GUSBP11Q6P575 273 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 RFLNAQ6ZTI6 216 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 CREB3L2Q70SY1 520 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 THOC6Q86W42 341 aaKnown RBP4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 RAB43Q86YS6 212 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 RIMKLAQ8IXN7 391 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 OR6V1Q8N148 313 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 OR51E1Q8TCB6 317 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 NABP1Q96AH0 204 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 ZIM3Q96PE6 472 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 SERPINI1Q99574 410 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 TEAD3Q99594 435 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 DOK1Q99704 481 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 APOL4Q9BPW4 351 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 NIPSNAP1Q9BPW8 284 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 PDCD1LG2Q9BQ51 273 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 ULBP3Q9BZM4 244 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 SLC22A4Q9H015 551 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 RBM38Q9H0Z9 239 aaKnown RBP4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 OR51J1Q9H342 316 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 AMBNQ9NP70 447 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 DEPPQ9NTK1 212 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 C14orf105Q9NVL8 296 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 TMEM9Q9P0T7 183 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 SLC23A2Q9UGH3 650 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 COL6A3P12111 3177 aa4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 MUC22E2RYF6 1773 aaPredicted RBP4.17□□□□□ -1.74
VPS35P1-201ENST00000563400 TGIF2-C20orf24A0A0A6YYL0 155 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 A0A0G2JLM5 398 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 IGHV5-10-1A0A0J9YXX1 117 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 SPAARA0A1B0GVQ0 90 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 RBMY1BA6NDE4 496 aaKnown RBP4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 RBMY1EA6NEQ0 496 aaKnown RBP4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 TRABD2BA6NFA1 517 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 EFCAB9A8MZ26 197 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 E9PLD3 99 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 CCL22O00626 93 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 IDH3BO43837 385 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 TRMUO75648 421 aaKnown RBP4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 RLN2P04090 185 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 RBMY1DP0C7P1 496 aaKnown RBP4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 RBMY1A1P0DJD3 496 aaKnown RBP4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 HIST1H1EP10412 219 aaKnown RBP4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 RAB5AP20339 215 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 OMPP47874 163 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 DNAJB13P59910 316 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 RPL18AQ02543 176 aaKnown RBP4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 IHHQ14623 411 aa4.16□□□□□ -1.74
VPS35P1-201ENST00000563400 OR7A5Q15622 319 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms