RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 CCDC107Q8WV48 283 aa8.24□□□□□ -1.09
UBFD1-202ENST00000563366 TMEM171Q8WVE6 324 aa8.24□□□□□ -1.09
UBFD1-202ENST00000563366 GTF3AQ92664 365 aaKnown RBP8.24□□□□□ -1.09
UBFD1-202ENST00000563366 EMG1Q92979 244 aaKnown RBP8.24□□□□□ -1.09
UBFD1-202ENST00000563366 DVL3Q92997 716 aaPredicted RBP8.24□□□□□ -1.09
UBFD1-202ENST00000563366 MRPL24Q96A35 216 aaKnown RBP8.24□□□□□ -1.09
UBFD1-202ENST00000563366 CCDC140Q96MF4 163 aa8.24□□□□□ -1.09
UBFD1-202ENST00000563366 CMSS1Q9BQ75 279 aaKnown RBP8.24□□□□□ -1.09
UBFD1-202ENST00000563366 FGF23Q9GZV9 251 aaPredicted RBP8.24□□□□□ -1.09
UBFD1-202ENST00000563366 TLNRD1Q9H1K6 362 aa8.24□□□□□ -1.09
UBFD1-202ENST00000563366 RIMS4Q9H426 269 aaPredicted RBP8.24□□□□□ -1.09
UBFD1-202ENST00000563366 IFT22Q9H7X7 185 aa8.24□□□□□ -1.09
UBFD1-202ENST00000563366 KCNJ16Q9NPI9 418 aa8.24□□□□□ -1.09
UBFD1-202ENST00000563366 MTCH1Q9NZJ7 389 aa8.24□□□□□ -1.09
UBFD1-202ENST00000563366 ERRFI1Q9UJM3 462 aaPredicted RBP8.24□□□□□ -1.09
UBFD1-202ENST00000563366 ZDHHC8Q9ULC8 765 aa8.24□□□□□ -1.09
UBFD1-202ENST00000563366 KCNK7Q9Y2U2 307 aa8.24□□□□□ -1.09
UBFD1-202ENST00000563366 ITPR1Q14643 2758 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 WIPF3A6NGB9 483 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 FAM90A27PA6NNH2 459 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 MCRIP1C9JLW8 97 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 H7C1Q1 480 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 MLNRO43193 412 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 SYNGR1O43759 233 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 SSX5O60225 188 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 NXPH2O95156 264 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 PTBP3O95758 552 aaKnown RBP8.23□□□□□ -1.09
UBFD1-202ENST00000563366 AMY2BP19961 511 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 AGAP20933 346 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 MDH2P40926 338 aaKnown RBP8.23□□□□□ -1.09
UBFD1-202ENST00000563366 ECI1P42126 302 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 OR3A3P47888 321 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 NPBWR2P48146 333 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 MECP2P51608 486 aaKnown RBP8.23□□□□□ -1.09
UBFD1-202ENST00000563366 CCR6P51684 374 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 RAB25P57735 213 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 BSPH1Q075Z2 132 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 IKZF1Q13422 519 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 SRSF7Q16629 238 aaKnown RBP eCLIP8.23□□□□□ -1.09
UBFD1-202ENST00000563366 VAX1Q5SQQ9 334 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 ATAD3CQ5T2N8 411 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 METTL11BQ5VVY1 283 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 SFRP4Q6FHJ7 346 aaPredicted RBP8.23□□□□□ -1.09
UBFD1-202ENST00000563366 PCSK4Q6UW60 755 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 BPIFB2Q8N4F0 458 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 OR51S1Q8NGJ8 323 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 OR5H2Q8NGV7 314 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 SNAPC3Q92966 411 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 ERGIC1Q969X5 290 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 MISP3Q96FF7 219 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 SCGB3A2Q96PL1 93 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 GINS4Q9BRT9 223 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 GPN1Q9HCN4 374 aaPredicted RBP8.23□□□□□ -1.09
UBFD1-202ENST00000563366 CA10Q9NS85 328 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 ZNF701Q9NV72 531 aaPredicted RBP8.23□□□□□ -1.09
UBFD1-202ENST00000563366 RASL12Q9NYN1 266 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 RCC2Q9P258 522 aaKnown RBP8.23□□□□□ -1.09
UBFD1-202ENST00000563366 POU2F3Q9UKI9 436 aa8.23□□□□□ -1.09
UBFD1-202ENST00000563366 POLEQ07864 2286 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 TRAV6A0A075B6T7 132 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 C7orf66A4D0T2 115 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 A6NLC8 198 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 CDIPTO14735 213 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 SH2D1BO14796 132 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 ZZEF1O43149 2961 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 FCER2P06734 321 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 THBDP07204 575 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 GRPP07492 148 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 HNRNPCP07910 306 aaKnown RBP eCLIP8.22□□□□□ -1.09
UBFD1-202ENST00000563366 HRH1P35367 487 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 SNU13P55769 128 aaKnown RBP8.22□□□□□ -1.09
UBFD1-202ENST00000563366 ARPC4P59998 168 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 ERVK11-1P61568 191 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 SUMO1P63165 101 aaKnown RBP8.22□□□□□ -1.09
UBFD1-202ENST00000563366 ADORA2A-AS1P86434 159 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 MSMPQ1L6U9 139 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 SMIM21Q3B7S5 101 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 ALKBH6Q3KRA9 238 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 CHRFAM7AQ494W8 412 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 BEX5Q5H9J7 111 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 TMEM255AQ5JRV8 349 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 NCMAPQ5T1S8 102 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 SIGIRRQ6IA17 410 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 IDO2Q6ZQW0 420 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 FAM90A1Q86YD7 464 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 OR2Z1Q8NG97 314 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 OR5AP2Q8NGF4 316 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 OR10Z1Q8NGY1 313 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 FBXW5Q969U6 566 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 ELMOD3Q96FG2 381 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 MED30Q96HR3 178 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 NRIP2Q9BQI9 281 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 FN3KRPQ9HA64 309 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 ZNF286AQ9HBT8 521 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 TREM2Q9NZC2 230 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 TAAR3PQ9P1P4 343 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 IL19Q9UHD0 177 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 AK3Q9UIJ7 227 aa8.22□□□□□ -1.09
UBFD1-202ENST00000563366 FBXO9Q9UK97 447 aaPredicted RBP8.22□□□□□ -1.09
UBFD1-202ENST00000563366 ELF5Q9UKW6 265 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms