RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 RPL31P62899 125 aaKnown RBP13.77□□□□□ -0.21
CLK3-207ENST00000562389 IL13RA2Q14627 380 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 C17orf107Q6ZR85 190 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 LRRTM1Q86UE6 522 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 CMTM4Q8IZR5 234 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 OR10K1Q8NGX5 313 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 PPP1R35Q8TAP8 253 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 S100A13Q99584 98 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 UQCC2Q9BRT2 126 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 PCGF1Q9BSM1 259 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 PPIL3Q9H2H8 161 aaKnown RBP13.77□□□□□ -0.21
CLK3-207ENST00000562389 C19orf12Q9NSK7 152 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 ONECUT1Q9UBC0 465 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 ING4Q9UNL4 249 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 NIPBLQ6KC79 2804 aaeCLIP13.77□□□□□ -0.21
CLK3-207ENST00000562389 TRAV40A0A0B4J280 105 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 M0R1W7 72 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 PSPNO60542 156 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 ZNF780AO75290 641 aaPredicted RBP13.76□□□□□ -0.21
CLK3-207ENST00000562389 ARL6IP5O75915 188 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 HTR3BO95264 441 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 IGHV4-38-2P0DP08 117 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 GABRR1P24046 479 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 FABP5Q01469 135 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 PDCD1Q15116 288 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 NHLRC3Q5JS37 347 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 Q6P435 159 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 FAM185AQ8N0U4 392 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 CHST4Q8NCG5 386 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 TBC1D15Q8TC07 691 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 MUL1Q969V5 352 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 PCDHB16Q9NRJ7 776 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 MRPS28Q9Y2Q9 187 aaKnown RBP13.76□□□□□ -0.21
CLK3-207ENST00000562389 CUBNO60494 3623 aa13.76□□□□□ -0.21
CLK3-207ENST00000562389 SIRPB1O00241 398 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 CCRL2O00421 344 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 CSTBP04080 98 aaKnown RBP13.75□□□□□ -0.21
CLK3-207ENST00000562389 ZNF44P15621 663 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 SERPINA2P20848 420 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 PSMB9P28065 219 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 OR3A1P47881 315 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 GPR176Q14439 515 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 GRK1Q15835 563 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 GLT8D1Q68CQ7 371 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 AWAT2Q6E213 333 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 CD200R1LQ6Q8B3 271 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 C1orf122Q6ZSJ8 110 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 GDPD3Q7L5L3 318 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 VMO1Q7Z5L0 202 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 OSR2Q8N2R0 312 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 Q8N7P7 452 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 OR4S1Q8NGB4 309 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 OR4M1Q8NGD0 313 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 OR4D6Q8NGJ1 314 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 FOXRED1Q96CU9 486 aaPredicted RBP13.75□□□□□ -0.21
CLK3-207ENST00000562389 SLITRK2Q9H156 845 aa13.75□□□□□ -0.21
CLK3-207ENST00000562389 A0A0G2JK05 382 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 A0A1W2PPH5 198 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 SLC33A1O00400 549 aaPredicted RBP13.74□□□□□ -0.21
CLK3-207ENST00000562389 MGST3O14880 152 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 DEGS1O15121 323 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 TNFAIP8O95379 198 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 CSN2P05814 226 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 CD37P11049 281 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 GALP22466 123 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 FPR2P25090 351 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 ERP29P30040 261 aaKnown RBP13.74□□□□□ -0.21
CLK3-207ENST00000562389 EDDM3BP56851 147 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 RBM11P57052 281 aaKnown RBP13.74□□□□□ -0.21
CLK3-207ENST00000562389 BPIFB3P59826 476 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 BLMHQ13867 455 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 TUSC1Q2TAM9 212 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 PIGYQ3MUY2 71 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 SLC22A6Q4U2R8 563 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 GPR157Q5UAW9 335 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 METAP1DQ6UB28 335 aaPredicted RBP13.74□□□□□ -0.21
CLK3-207ENST00000562389 GLIPR1L1Q6UWM5 242 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 C9orf139Q6ZV77 190 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 LINC00596Q86U02 117 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 C1orf147Q96MC9 270 aaPredicted RBP13.74□□□□□ -0.21
CLK3-207ENST00000562389 NR1H4Q96RI1 486 aaPredicted RBP13.74□□□□□ -0.21
CLK3-207ENST00000562389 CHST6Q9GZX3 395 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 UNKLQ9H9P5 680 aaKnown RBP13.74□□□□□ -0.21
CLK3-207ENST00000562389 ZNF69Q9UC07 566 aa13.74□□□□□ -0.21
CLK3-207ENST00000562389 IGHV3OR16-10A0A075B7F0 116 aa13.73□□□□□ -0.21
CLK3-207ENST00000562389 CENPVL3A0A0U1RRI6 287 aa13.73□□□□□ -0.21
CLK3-207ENST00000562389 TRDV1A0A1B0GX56 115 aa13.73□□□□□ -0.21
CLK3-207ENST00000562389 GTF2F2P13984 249 aa13.73□□□□□ -0.21
CLK3-207ENST00000562389 MEF2CQ06413 473 aaPredicted RBP13.73□□□□□ -0.21
CLK3-207ENST00000562389 ZNF273Q14593 569 aa13.73□□□□□ -0.21
CLK3-207ENST00000562389 C1orf100Q5SVJ3 147 aa13.73□□□□□ -0.21
CLK3-207ENST00000562389 SYT6Q5T7P8 510 aaPredicted RBP13.73□□□□□ -0.21
CLK3-207ENST00000562389 TMEM200BQ69YZ2 307 aa13.73□□□□□ -0.21
CLK3-207ENST00000562389 BPIFB2Q8N4F0 458 aa13.73□□□□□ -0.21
CLK3-207ENST00000562389 MRPS24Q96EL2 167 aaKnown RBP13.73□□□□□ -0.21
CLK3-207ENST00000562389 IFT22Q9H7X7 185 aa13.73□□□□□ -0.21
CLK3-207ENST00000562389 METTL8Q9H825 291 aaKnown RBP13.73□□□□□ -0.21
CLK3-207ENST00000562389 GHRLQ9UBU3 117 aa13.73□□□□□ -0.21
CLK3-207ENST00000562389 ST3GAL6Q9Y274 331 aa13.73□□□□□ -0.21
CLK3-207ENST00000562389 A0A0A6YYJ9 748 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms