RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 NHLRC3Q5JS37 347 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 CLEC12AQ5QGZ9 265 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 TPTE2P1Q5T6R2 138 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 HIST2H3PS2Q5TEC6 136 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 KDM4DQ6B0I6 523 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 ANKRD16Q6P6B7 361 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 FAM19A1Q7Z5A9 133 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 TSEN54Q7Z6J9 526 aaKnown RBP4.74□□□□□ -1.65
CAPN3-211ENST00000562199 PARP16Q8N5Y8 322 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 GCSAMQ8N6F7 178 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 IQCF1Q8N6M8 205 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 BEST4Q8NFU0 473 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 OR2AJ1Q8NGZ0 328 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 OR2G2Q8NGZ5 317 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 PYCR2Q96C36 320 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 F2RL3Q96RI0 385 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 GFM1Q96RP9 751 aaKnown RBP4.74□□□□□ -1.65
CAPN3-211ENST00000562199 SYT3Q9BQG1 590 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 EFCAB11Q9BUY7 163 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 GABARAPL3Q9BY60 117 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 SLC29A3Q9BZD2 475 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 ZNF436Q9C0F3 470 aaPredicted RBP4.74□□□□□ -1.65
CAPN3-211ENST00000562199 TMEM126AQ9H061 195 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 IKZF5Q9H5V7 419 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 SLC17A5Q9NRA2 495 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 RBFOX1Q9NWB1 397 aaKnown RBP4.74□□□□□ -1.65
CAPN3-211ENST00000562199 FBXL12Q9NXK8 326 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 IL36GQ9NZH8 169 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 TRAPPC4Q9Y296 219 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 RCL1Q9Y2P8 373 aaKnown RBP4.74□□□□□ -1.65
CAPN3-211ENST00000562199 MRPS17Q9Y2R5 130 aaKnown RBP4.74□□□□□ -1.65
CAPN3-211ENST00000562199 RPL36Q9Y3U8 105 aaKnown RBP4.74□□□□□ -1.65
CAPN3-211ENST00000562199 PLXNA3P51805 1871 aa4.74□□□□□ -1.65
CAPN3-211ENST00000562199 DENND4AQ7Z401 1863 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 MYO16Q9Y6X6 1858 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 MCM3APO60318 1980 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 ANKRD20A5PA0PJZ0 165 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 CASTOR2A6NHX0 329 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 A8MVM7 634 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 E9PLN8 166 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 RPL36A-HNRNPH2H7BZ11 118 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 PLPP1O14494 284 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 DVL1O14640 695 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 TRAPPC6AO75865 159 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 SNAPC5O75971 98 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 OR7C1O76099 320 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-211ENST00000562199 IGF1P05019 195 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 APODP05090 189 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 SMIM17P0DL12 118 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 SULT1A3P0DMM9 295 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 SULT1A4P0DMN0 295 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 SLC2A2P11168 524 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-211ENST00000562199 ABOP16442 354 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 RCC1P18754 421 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-211ENST00000562199 MAOAP21397 527 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 GADD45AP24522 165 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 TGFBR1P36897 503 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 GABRA2P47869 451 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 DAPP51397 102 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 DVL1P1P54792 670 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-211ENST00000562199 XGP55808 180 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 ARPP19P56211 112 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 RPL38P63173 70 aaKnown RBP4.73□□□□□ -1.65
CAPN3-211ENST00000562199 EFEMP1Q12805 493 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 GPR18Q14330 331 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 IHHQ14623 411 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 MELKQ14680 651 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 RHEBQ15382 184 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 MORN2Q502X0 79 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 OR2T5Q6IEZ7 315 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 FAAP20Q6NZ36 180 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 PRSS54Q6PEW0 395 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 AGTRAPQ6RW13 159 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 FBXW12Q6X9E4 464 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 CHMP1BQ7LBR1 199 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 ANKRD33Q7Z3H0 272 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 C5orf24Q7Z6I8 188 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 MOB3BQ86TA1 216 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 IZUMO1Q8IYV9 350 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 CMTM1Q8IZ96 169 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 SLC22A15Q8IZD6 547 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 CA13Q8N1Q1 262 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 OSR2Q8N2R0 312 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 PGBD5Q8N414 524 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 BPIFB2Q8N4F0 458 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 C15orf54Q8N8G6 183 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 OR6K6Q8NGW6 343 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 OR2T29Q8NH02 315 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 RXFP4Q8TDU9 374 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 SLC38A5Q8WUX1 472 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 NEU4Q8WWR8 484 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-211ENST00000562199 TMEM37Q8WXS4 190 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 BADQ92934 168 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 WDR92Q96MX6 357 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 OXGR1Q96P68 337 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 GNRHR2Q96P88 292 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 OR2M4Q96R27 311 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 TRIB3Q96RU7 358 aa4.73□□□□□ -1.65
CAPN3-211ENST00000562199 CDX2Q99626 313 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-211ENST00000562199 PKMYT1Q99640 499 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms