RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 VSIG8P0DPA2 414 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 GABRG2P18507 467 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 ECI1P42126 302 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 TAS2R46P59540 309 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 UBE2NP61088 152 aaKnown RBP16.27■□□□□ 0.2
RAB40C-206ENST00000561781 ZNF74Q16587 644 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 PRICKLE4Q2TBC4 344 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 CISD2Q8N5K1 135 aaKnown RBP16.27■□□□□ 0.2
RAB40C-206ENST00000561781 METTL27Q8N6F8 245 aaPredicted RBP16.27■□□□□ 0.2
RAB40C-206ENST00000561781 OR10S1Q8NGN2 331 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 ARRDC3Q96B67 414 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 MRGPRX1Q96LB2 322 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 KIR3DX1Q9H7L2 352 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 CISD1Q9NZ45 108 aaKnown RBP16.27■□□□□ 0.2
RAB40C-206ENST00000561781 DAPP1Q9UN19 280 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 EDDM13A0A1B0GTR0 161 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 XRCC2O43543 280 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 CD55P08174 381 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 CT45A8P0DMV1 189 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 CT45A9P0DMV2 189 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 DCAF7P61962 342 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 MMDQ15546 238 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 CT45A2Q5DJT8 189 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 TPTE2P1Q5T6R2 138 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 TMEFF1Q8IYR6 380 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 TNFRSF14Q92956 283 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 MAGT1Q9H0U3 335 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.27■□□□□ 0.19
RAB40C-206ENST00000561781 FBLN5Q9UBX5 448 aa16.27■□□□□ 0.19
RAB40C-206ENST00000561781 ANKUB1A6NFN9 424 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 IFNL4K9M1U5 179 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 NKX2-2O95096 273 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 MMP9P14780 707 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 GZMHP20718 246 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 SFTPDP35247 375 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 GALR1P47211 349 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 EMP2P54851 167 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 ERVS71-1P61550 626 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 RPL18Q07020 188 aaKnown RBP16.26■□□□□ 0.19
RAB40C-206ENST00000561781 SYT13Q7L8C5 426 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 C16orf82Q7Z2V1 217 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 NICN1Q9BSH3 213 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 IGHV2-70DA0A0C4DH43 119 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 ELAVL3Q14576 367 aaKnown RBP16.26■□□□□ 0.19
RAB40C-206ENST00000561781 MPV17LQ2QL34 196 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 MARCH3Q86UD3 253 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 CMTM1Q8IZ96 169 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 FBXL14Q8N1E6 418 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 C17orf78Q8N4C9 275 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 TSTD1Q8NFU3 115 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 GNPNAT1Q96EK6 184 aaPredicted RBP16.26■□□□□ 0.19
RAB40C-206ENST00000561781 BOD1Q96IK1 185 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 CYYR1Q96J86 154 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 EHFQ9NZC4 300 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 OR6C3Q9NZP0 311 aa16.26■□□□□ 0.19
RAB40C-206ENST00000561781 TRAV1-1A0A0B4J248 108 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 A0A1W2PP55 124 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 DTYMKP23919 212 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 MGAT2Q10469 447 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 TDRG1Q3Y452 100 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 EMC4Q5J8M3 183 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 SPEM1Q8N4L4 309 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 TMEM52Q8NDY8 209 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 ADAMTS18Q8TE60 1221 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 PGAM5Q96HS1 289 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 TMEM9BQ9NQ34 198 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 ZNF319Q9P2F9 582 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 COX11Q9Y6N1 276 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 ZNF318Q5VUA4 2279 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 GPR179Q6PRD1 2367 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 LOC107986453A0A1B0GWG9 222 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 FAM221AA4D161 298 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 ST8SIA3O43173 380 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 TYMSP04818 313 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 HSD11B1P28845 292 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 EWSR1Q01844 656 aaKnown RBP eCLIP16.25■□□□□ 0.19
RAB40C-206ENST00000561781 ZNF92Q03936 586 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 SLC18B1Q6NT16 456 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 TMPRSS7Q7RTY8 843 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 SULF2Q8IWU5 870 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 SLC22A24Q8N4F4 322 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 OR52R1Q8NGF1 315 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 P2RX4Q99571 388 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 LRP12Q9Y561 859 aa16.25■□□□□ 0.19
RAB40C-206ENST00000561781 MUC6Q6W4X9 2439 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 F6UZH7 168 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 K7ESF4 209 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 HRASP01112 189 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 HIST1H1DP16402 221 aaKnown RBP16.24■□□□□ 0.19
RAB40C-206ENST00000561781 CMPK1P30085 196 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 S100A7P31151 101 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 ROM1Q03395 351 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 CST6Q15828 149 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 MORN2Q502X0 79 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 FBLN7Q53RD9 439 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 KCTD18Q6PI47 426 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-206ENST00000561781 ERN2Q76MJ5 926 aaKnown RBP16.24■□□□□ 0.19
RAB40C-206ENST00000561781 NUP54Q7Z3B4 507 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 CENPVQ7Z7K6 275 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-206ENST00000561781 DEFB119Q8N690 84 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms