RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 RAB38P57729 211 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 TAS2R30P59541 319 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 RPL15P61313 204 aaKnown RBP6.34□□□□□ -1.39
CDH1-203ENST00000561751 LCN6P62502 163 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 SUMO1P63165 101 aaKnown RBP6.34□□□□□ -1.39
CDH1-203ENST00000561751 CSNK1G2P78368 415 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 MRPS6P82932 125 aaKnown RBP6.34□□□□□ -1.39
CDH1-203ENST00000561751 SERF2P84101 59 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 PLPPR5Q32ZL2 321 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 SMIM21Q3B7S5 101 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 MRPL2Q5T653 305 aaKnown RBP6.34□□□□□ -1.39
CDH1-203ENST00000561751 WDR25Q64LD2 544 aaPredicted RBP6.34□□□□□ -1.39
CDH1-203ENST00000561751 PRR27Q6MZM9 219 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 SLC18B1Q6NT16 456 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 FBXO42Q6P3S6 717 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 GLB1LQ6UWU2 654 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 ZNF765Q7L2R6 523 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 NPAS4Q8IUM7 802 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 SHISA5Q8N114 240 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 LGI3Q8N145 548 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 RAB42Q8N4Z0 105 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 FAM89BQ8N5H3 189 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 OR2C3Q8N628 320 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 C10orf53Q8N6V4 93 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 STPG4Q8N801 248 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 LRRC75AQ8NAA5 344 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 BHLHE23Q8NDY6 225 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 OR5D18Q8NGL1 313 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 OR1L6Q8NGR2 347 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 C11orf40Q8WZ69 217 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 TOMM40LQ969M1 308 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 SPSB1Q96BD6 273 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 PINX1Q96BK5 328 aaKnown RBP6.34□□□□□ -1.39
CDH1-203ENST00000561751 SLC25A44Q96H78 314 aaPredicted RBP6.34□□□□□ -1.39
CDH1-203ENST00000561751 WDYHV1Q96HA8 205 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 PGAM5Q96HS1 289 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 C18orf12Q96KH6 178 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 NMNAT3Q96T66 252 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 SPIN2AQ99865 258 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 SPIN2BQ9BPZ2 258 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 ELOVL1Q9BW60 279 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 OR51I2Q9H344 312 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 HSF4Q9ULV5 492 aa6.34□□□□□ -1.39
CDH1-203ENST00000561751 MRPS23Q9Y3D9 190 aaKnown RBP6.34□□□□□ -1.39
CDH1-203ENST00000561751 MRPL42Q9Y6G3 142 aaKnown RBP6.34□□□□□ -1.39
CDH1-203ENST00000561751 TRANK1O15050 2925 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 HELZP42694 1942 aaKnown RBP6.33□□□□□ -1.4
CDH1-203ENST00000561751 TRBV9A0A0B4J1U6 114 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 IGHV2-26A0A0B4J1V2 119 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 A0A0G2JN53 185 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 A0A1B0GV72 72 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 SERPINE3A8MV23 424 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 GRXCR1A8MXD5 290 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 CORTO00230 105 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 SIRPB1O00241 398 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 HLA-HP01893 362 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 DBHP09172 617 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 SMIM17P0DL12 118 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 PNMTP11086 282 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 HIST1H1DP16402 221 aaKnown RBP6.33□□□□□ -1.4
CDH1-203ENST00000561751 FAHP16930 419 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 KLK2P20151 261 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 CORO1AP31146 461 aaKnown RBP6.33□□□□□ -1.4
CDH1-203ENST00000561751 ACAA2P42765 397 aaKnown RBP6.33□□□□□ -1.4
CDH1-203ENST00000561751 HNRNPA3P51991 378 aaKnown RBP6.33□□□□□ -1.4
CDH1-203ENST00000561751 FGF8P55075 233 aaPredicted RBP6.33□□□□□ -1.4
CDH1-203ENST00000561751 EWSR1Q01844 656 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDH1-203ENST00000561751 TFF2Q03403 129 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 RBPJQ06330 500 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 PMCHL1Q16048 86 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 ASPHD2Q6ICH7 369 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 ABHD17CQ6PCB6 329 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 CBLN3Q6UW01 205 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 CMTM1Q8IZ96 169 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 GVQW1Q8N7I0 195 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 CHST4Q8NCG5 386 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 SLC16A11Q8NCK7 471 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 ZNF740Q8NDX6 193 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 CADM4Q8NFZ8 388 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 OR5AU1Q8NGC0 362 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 OR13G1Q8NGZ3 307 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 CMTM2Q8TAZ6 248 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 ZNRF4Q8WWF5 429 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 TMEM37Q8WXS4 190 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 TMEM234Q8WY98 164 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 ARRDC3Q96B67 414 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 RASL10BQ96S79 203 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 MACROD1Q9BQ69 325 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 HDAC8Q9BY41 377 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 ZNF700Q9H0M5 742 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 ELOVL3Q9HB03 270 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 LAMP3Q9UQV4 416 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 HS3ST2Q9Y278 367 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 KLHDC2Q9Y2U9 406 aa6.33□□□□□ -1.4
CDH1-203ENST00000561751 RBM7Q9Y580 266 aaKnown RBP6.33□□□□□ -1.4
CDH1-203ENST00000561751 SLC38A8A6NNN8 435 aa6.32□□□□□ -1.4
CDH1-203ENST00000561751 ZNF814B7Z6K7 855 aa6.32□□□□□ -1.4
CDH1-203ENST00000561751 SMAD9O15198 467 aaKnown RBP6.32□□□□□ -1.4
CDH1-203ENST00000561751 PAX4O43316 350 aa6.32□□□□□ -1.4
CDH1-203ENST00000561751 SRSF10O75494 262 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms