RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 MXD1Q05195 221 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 RPL18Q07020 188 aaKnown RBP2.66□□□□□ -1.98
SPG11-225ENST00000561391 SLC3A1Q07837 685 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 PUDPQ08623 228 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 SPOCK1Q08629 439 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 CDK5R1Q15078 307 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 CD226Q15762 336 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 STK11Q15831 433 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 ZNF239Q16600 458 aaKnown RBP2.66□□□□□ -1.98
SPG11-225ENST00000561391 NTRK2Q16620 822 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 Q499Y3 187 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 TEX30Q5JUR7 227 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 THEM4Q5T1C6 240 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 IDNKQ5T6J7 187 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 SFXN4Q6P4A7 337 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 CNIH2Q6PI25 160 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 PAQR6Q6TCH4 344 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 FIP1L1Q6UN15 594 aaKnown RBP2.66□□□□□ -1.98
SPG11-225ENST00000561391 PLET1Q6UQ28 207 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 CBLN3Q6UW01 205 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 UNQ9370/PRO34162Q6UXP9 181 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 APOOLQ6UXV4 268 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 TMEM91Q6ZNR0 172 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 GDPD3Q7L5L3 318 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 FAM122BQ7Z309 247 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 MARCH3Q86UD3 253 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.66□□□□□ -1.98
SPG11-225ENST00000561391 CDH26Q8IXH8 852 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 C9orf40Q8IXQ3 194 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 TIGD4Q8IY51 512 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 ZNF679Q8IYX0 411 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 YIPF7Q8N8F6 280 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 LRRC75AQ8NAA5 344 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 CYB561A3Q8NBI2 242 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 DUSP18Q8NEJ0 188 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 CCDC54Q8NEL0 328 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 BBS1Q8NFJ9 593 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 OR5AK2Q8NH90 309 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 CLDND2Q8NHS1 167 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 OTOSQ8NHW6 89 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 ZNF671Q8TAW3 534 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 FNDC9Q8TBE3 224 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 ENKURQ8TC29 256 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 GPR148Q8TDV2 347 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 DOK4Q8TEW6 326 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 RNF138Q8WVD3 245 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 NSMAFQ92636 917 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 TAAR8Q969N4 342 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 ITFG2Q969R8 447 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 CREB3L1Q96BA8 519 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 SPACA9Q96E40 222 aaPredicted RBP2.66□□□□□ -1.98
SPG11-225ENST00000561391 PELI1Q96FA3 418 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 PGAM5Q96HS1 289 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 RADILQ96JH8 1075 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 C4orf36Q96KX1 117 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 Q96M85 177 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 ASCL2Q99929 193 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 ATF6BQ99941 703 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 NUDT16L1Q9BRJ7 211 aaKnown RBP2.66□□□□□ -1.98
SPG11-225ENST00000561391 NAA11Q9BSU3 229 aaPredicted RBP2.66□□□□□ -1.98
SPG11-225ENST00000561391 SRRQ9GZT4 340 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 HRH4Q9H3N8 390 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 RERGLQ9H628 205 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 METTL7AQ9H8H3 244 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 MARCH7Q9H992 704 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 ISG20L2Q9H9L3 353 aaKnown RBP2.66□□□□□ -1.98
SPG11-225ENST00000561391 NEK6Q9HC98 313 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 MYOZ1Q9NP98 299 aaPredicted RBP2.66□□□□□ -1.98
SPG11-225ENST00000561391 SLC17A5Q9NRA2 495 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 TAS2R8Q9NYW2 309 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 TAS2R5Q9NYW4 299 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 ZNF224Q9NZL3 707 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 C1RLQ9NZP8 487 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 EMC3Q9P0I2 261 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 GNG8Q9UK08 70 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 B9D1Q9UPM9 204 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 RASD1Q9Y272 281 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 HDGFL3Q9Y3E1 203 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 CHCHD2Q9Y6H1 151 aaPredicted RBP2.66□□□□□ -1.98
SPG11-225ENST00000561391 V9GYH0 126 aa2.66□□□□□ -1.98
SPG11-225ENST00000561391 FRAS1Q86XX4 4008 aa2.65□□□□□ -1.98
SPG11-225ENST00000561391 SAA2-SAA4A0A096LPE2 208 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 A0A0A6YYH2 397 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 FAM240BA0A1B0GVZ2 78 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 PLSCR5A0PG75 271 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 NAP1L6A6NFF2 107 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 A6NJ64 397 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 IFITM5A6NNB3 132 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 FTCDNL1E5RQL4 147 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 LRRN3E7EW58 273 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 CLDN34H7C241 214 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 AIPO00170 330 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 ZNF593O00488 134 aaPredicted RBP2.65□□□□□ -1.99
SPG11-225ENST00000561391 GSTZ1O43708 216 aaPredicted RBP2.65□□□□□ -1.99
SPG11-225ENST00000561391 SCO2O43819 266 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 SLC16A7O60669 478 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 HPGDSO60760 199 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 CBR3O75828 277 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 MPZL1O95297 269 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 DHFRP00374 187 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms