RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PAHP00439 452 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 PRKACAP17612 351 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 GTF2A1P52655 376 aaPredicted RBP13□□□□□ -0.33
LMX1B-204ENST00000561065 PROK1P58294 105 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 COL10A1Q03692 680 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 MEF2CQ06413 473 aaPredicted RBP13□□□□□ -0.33
LMX1B-204ENST00000561065 KISS1Q15726 138 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 YIF1BQ5BJH7 314 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 TMEM200BQ69YZ2 307 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 TREML4Q6UXN2 200 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 OR4M1Q8NGD0 313 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 SMIM19Q96E16 107 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 PAK1IP1Q9NWT1 392 aaPredicted RBP13□□□□□ -0.33
LMX1B-204ENST00000561065 IL36RNQ9UBH0 155 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 TPRKBQ9Y3C4 175 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 hADV38S2A0JD32 116 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 MEGF11A6BM72 1044 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 KCNAB3O43448 404 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 ANGPTL7O43827 346 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 ZNF737O75373 536 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 HAND1O96004 215 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 ALDOBP05062 364 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 GABRR1P24046 479 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 DLX6P56179 175 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 LGALS4P56470 323 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 ZNF146Q15072 292 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 OR2G6Q5TZ20 316 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 TCF23Q7RTU1 214 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 SATL1Q86VE3 508 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 OR8H2Q8N162 312 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 CHST4Q8NCG5 386 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 OR10AC1Q8NH08 325 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 GHSRQ92847 366 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 TMEM106AQ96A25 262 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 HMG20AQ9NP66 347 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 EXOSC4Q9NPD3 245 aaKnown RBP12.99□□□□□ -0.33
LMX1B-204ENST00000561065 TMEM138Q9NPI0 162 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 RNF114Q9Y508 228 aa12.99□□□□□ -0.33
LMX1B-204ENST00000561065 MEX3AA1L020 520 aaKnown RBP12.98□□□□□ -0.33
LMX1B-204ENST00000561065 CD1AP06126 327 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 GNAO1P09471 354 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 BCL3P20749 454 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 SOX2P48431 317 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 MTNR1BP49286 362 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 WNT4P56705 351 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 EDDM3BP56851 147 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 RNLSQ5VYX0 342 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 DHRS7BQ6IAN0 325 aaPredicted RBP12.98□□□□□ -0.33
LMX1B-204ENST00000561065 BRICD5Q6PL45 260 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 GDPGP1Q6ZNW5 385 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 C17orf107Q6ZR85 190 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 AHSA2Q719I0 299 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 BEND2Q8NDZ0 799 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 PXT1Q8NFP0 134 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 FBLIM1Q8WUP2 373 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 MND1Q9BWT6 205 aa12.98□□□□□ -0.33
LMX1B-204ENST00000561065 PTGES3LE9PB15 166 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 H3BUI4 141 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 H3BUX3 64 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 MGST3O14880 152 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 XPNPEP2O43895 674 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 ZNF780AO75290 641 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-204ENST00000561065 CLPXO76031 633 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 KDM4BO94953 1096 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 RBP4P02753 201 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 COX7A1P24310 79 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 MAPK3P27361 379 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-204ENST00000561065 RSU1Q15404 277 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 GRK1Q15835 563 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 Q499Y3 187 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 MIDNQ504T8 468 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 C6orf141Q5SZD1 244 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 DMKNQ6E0U4 476 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-204ENST00000561065 ZNF782Q6ZMW2 699 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-204ENST00000561065 RNF144BQ7Z419 303 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 MS4A15Q8N5U1 240 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 DTX3Q8N9I9 347 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 RPS4Y2Q8TD47 263 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 RFT1Q96AA3 541 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 RBFOX1Q9NWB1 397 aaKnown RBP12.97□□□□□ -0.33
LMX1B-204ENST00000561065 NKX1-2Q9UD57 310 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-204ENST00000561065 CLEC2DQ9UHP7 191 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 GSTK1Q9Y2Q3 226 aa12.97□□□□□ -0.33
LMX1B-204ENST00000561065 TMEM82A0PJX8 343 aa12.96□□□□□ -0.33
LMX1B-204ENST00000561065 DEGS1O15121 323 aa12.96□□□□□ -0.33
LMX1B-204ENST00000561065 CSTBP04080 98 aaKnown RBP12.96□□□□□ -0.33
LMX1B-204ENST00000561065 ZNF728P0DKX0 622 aa12.96□□□□□ -0.33
LMX1B-204ENST00000561065 ERP29P30040 261 aaKnown RBP12.96□□□□□ -0.33
LMX1B-204ENST00000561065 BDKRB2P30411 391 aa12.96□□□□□ -0.33
LMX1B-204ENST00000561065 NPBWR2P48146 333 aa12.96□□□□□ -0.33
LMX1B-204ENST00000561065 BDH1Q02338 343 aa12.96□□□□□ -0.33
LMX1B-204ENST00000561065 GPR176Q14439 515 aa12.96□□□□□ -0.33
LMX1B-204ENST00000561065 NANOGP1Q8N7R0 232 aa12.96□□□□□ -0.33
LMX1B-204ENST00000561065 OR13D1Q8NGV5 346 aa12.96□□□□□ -0.33
LMX1B-204ENST00000561065 OR5R1Q8NH85 324 aa12.96□□□□□ -0.33
LMX1B-204ENST00000561065 C16orf95Q9H693 158 aa12.96□□□□□ -0.33
LMX1B-204ENST00000561065 C17orf98A8MV24 154 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 GPX5O75715 221 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 TSPAN9O75954 239 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 CDK1P06493 297 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms