RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ENTHD1Q8IYW4 607 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 OR8U1Q8NH10 309 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 UTP4Q969X6 686 aaKnown RBP14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 PRRG3Q9BZD7 231 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 LINC00527Q9UJ94 153 aa14.07□□□□□ -0.16
TSPAN3-208ENST00000560514 TRGV10A0A0A0MS01 117 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 FAM172BPA6NC97 362 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 OOSP1A8MZH6 123 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 MGST3O14880 152 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 MMP23AO75900 390 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 HAND1O96004 215 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 IGLV3-1P01715 115 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 SNRNP70P08621 437 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 CDK2P24941 298 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 RIDAP52758 137 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 EFNB1P98172 346 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 HES1Q14469 280 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 RBM39Q14498 530 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 KPNB1Q14974 876 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 PTGES3Q15185 160 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 TMEM42Q69YG0 159 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 BBS1Q8NFJ9 593 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 EMG1Q92979 244 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 SLAMF9Q96A28 289 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 ZMAT4Q9H898 229 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 NUFIP1Q9UHK0 495 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 IKZF2Q9UKS7 526 aa14.06□□□□□ -0.16
TSPAN3-208ENST00000560514 A6NIN4 97 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 BUB1B-PAK6H3BSN5 160 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 IGLV1-47P01700 117 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 IGHA1P01876 353 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 DAPP51397 102 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 HCCSP53701 268 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 HLA-DRB5Q30154 266 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 TEX38Q6PEX7 206 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 BAIAP2L2Q6UXY1 529 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 HEPN1Q6WQI6 88 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 SLC35E3Q7Z769 313 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 RPEQ96AT9 228 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 PCDHB16Q9NRJ7 776 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 FAM53CQ9NYF3 392 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 MTCH1Q9NZJ7 389 aa14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 H2AFY2Q9P0M6 372 aaPredicted RBP14.05□□□□□ -0.16
TSPAN3-208ENST00000560514 FUOMA2VDF0 154 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 CCDC182A6NF36 153 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 LOC110117498-PIK3R3F6TDL0 507 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 F8VVB4 439 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 F8VWA3 439 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 TTRP02766 147 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 ERP29P30040 261 aaKnown RBP14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 P2RX3P56373 397 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 DEFB136Q30KP8 78 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 ZNF260Q3ZCT1 412 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 ZFAND6Q6FIF0 208 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 LCNL1Q6ZST4 164 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 THNSL2Q86YJ6 484 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 OR52N4Q8NGI2 321 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 CADM1Q9BY67 442 aaKnown RBP14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 DCLRE1BQ9H816 532 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 PLEKHA1Q9HB21 404 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 ENOPH1Q9UHY7 261 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 SIRT4Q9Y6E7 314 aaPredicted RBP14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 V9GYS6 101 aa14.04□□□□□ -0.16
TSPAN3-208ENST00000560514 TMEM11P17152 192 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 RASSF2P50749 326 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 CXorf66Q5JRM2 361 aaPredicted RBP14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 BCL2L15Q5TBC7 163 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 NXNL2Q5VZ03 156 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 Q6ZSR3 168 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 SBSPONQ8IVN8 264 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 Q8IYB0 196 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 STPG2Q8N412 459 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 C5orf56Q8N8D9 126 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 OR4D6Q8NGJ1 314 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 TOMM40LQ969M1 308 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 HRASLS5Q96KN8 279 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 CNN2Q99439 309 aaKnown RBP14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 GON7Q9BXV9 100 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 MOB1AQ9H8S9 216 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 ZNF286AQ9HBT8 521 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 TAS2R3Q9NYW6 316 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 DNAH7Q8WXX0 4024 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 SORL1Q92673 2214 aa14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 HUWE1Q7Z6Z7 4374 aaKnown RBP14.03□□□□□ -0.16
TSPAN3-208ENST00000560514 DHRS7CA6NNS2 312 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 G3V2T6 193 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 FGF16O43320 207 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 PSPNO60542 156 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 CYB5AP00167 134 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 CD34P28906 385 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 MFGE8Q08431 387 aaPredicted RBP14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 KIR2DS1Q14954 304 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 PNLIPRP3Q17RR3 467 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 AADACL4Q5VUY2 407 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 SLC25A26Q70HW3 274 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 OR14K1Q8NGZ2 314 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 OR56B4Q8NH76 319 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 TTTY10Q9BZA0 68 aa14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 SEBOXQ9HB31 216 aaPredicted RBP14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 SCOCQ9UIL1 159 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms